DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2919 contig Csv1_Contig2919:612..1314. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ILLOL (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Illicium oligandrum GN=ndhH PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.894e-103
Identity = 181/200 (90.50%), Postives = 190/200 (95.00%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ AT K+   MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE+LGNI++PKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYI REREL+YDLFEA TGMRMMHNYFRIGGVAADLP+GWIDKCLDFCDY LTGVAEYQK ITRNPI
Sbjct:    1 MTVPATRKD--LMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEELGNIQIPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYISRERELLYDLFEAVTGMRMMHNYFRIGGVAADLPHGWIDKCLDFCDYSLTGVAEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_LOTJA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lotus japonicus GN=ndhH PE=3 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 2.473e-103
Identity = 180/200 (90.00%), Postives = 189/200 (94.50%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ AT K+   MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE +YDLFEAATGMRMMHN+FRIGGVAADLP+GWIDKC DFC+YF T V EYQK ITRNPI
Sbjct:    1 MNVPATRKD--LMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFIYDLFEAATGMRMMHNFFRIGGVAADLPHGWIDKCFDFCNYFFTRVVEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CICAR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cicer arietinum GN=ndhH PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.230e-103
Identity = 178/191 (93.19%), Postives = 185/191 (96.86%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHN+FRIGGV+ADLPYGWIDKC DFC+YFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNFFRIGGVSADLPYGWIDKCFDFCNYFLTRVIEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_AETCO (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Aethionema cordifolium GN=ndhH PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.230e-103
Identity = 177/191 (92.67%), Postives = 184/191 (96.34%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVN+GPHHPSMHGVLRLIVTLDG DV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNIGPHHPSMHGVLRLIVTLDGGDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_DIOEL (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Dioscorea elephantipes GN=ndhH PE=3 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 5.510e-103
Identity = 177/194 (91.24%), Postives = 187/194 (96.39%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +  K  MIVNMGPHHPSMHGVLRLIVTL+GEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PEQLGN++VP+RASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEA+TGMRMMHNYFRIGGVAADLP+GWIDKCLDFCDYFLT VAEY+K ITRNPI
Sbjct:    5 DTRKGLMIVNMGPHHPSMHGVLRLIVTLEGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGNVQVPQRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELLYDLFEASTGMRMMHNYFRIGGVAADLPHGWIDKCLDFCDYFLTRVAEYEKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_DAUCA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Daucus carota GN=ndhH PE=3 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.228e-102
Identity = 178/196 (90.82%), Postives = 185/196 (94.39%), Query Frame = 3
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A     + MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHN+FRIGGVAADLP+GWIDKCLDFCDYFLT V EYQ+ ITRNPI
Sbjct:    3 APATRNDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNFFRIGGVAADLPHGWIDKCLDFCDYFLTRVTEYQRLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_PANGI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Panax ginseng GN=ndhH PE=3 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 1.603e-102
Identity = 177/196 (90.31%), Postives = 186/196 (94.90%), Query Frame = 3
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A+    + MIVN+GP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPF+ADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLP+GWIDKCLDFCD+FLT V EYQK ITRNPI
Sbjct:    3 ASATRNDLMIVNLGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFLADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPHGWIDKCLDFCDFFLTRVTEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_FAGEA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=ndhH PE=3 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 2.094e-102
Identity = 174/191 (91.10%), Postives = 184/191 (96.34%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEP+LG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+N PEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFC+YFL  +AEYQ  ITRNPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPVLGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCEYFLPAIAEYQTLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_AMBTC (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Amborella trichopoda GN=ndhH PE=3 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 2.094e-102
Identity = 179/200 (89.50%), Postives = 189/200 (94.50%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ AT  +   MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE+LGNI+VP+RASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFE ATGMRMMHN+FRIGGVAADLP+GWIDKCLDFCDYFL  VAEYQK ITRNPI
Sbjct:    1 MTVPATRND--LMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEELGNIQVPRRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELLYDLFETATGMRMMHNFFRIGGVAADLPHGWIDKCLDFCDYFLPEVAEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SORBI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Sorghum bicolor GN=ndhH PE=3 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.315e-101
Identity = 174/193 (90.16%), Postives = 184/193 (95.34%), Query Frame = 3
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENR+IIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFL GV EYQ+ ITRNPI
Sbjct:    6 KRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRSIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWMDKCLDFCDYFLQGVVEYQQLITRNPI 198          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_ILLOL1.894e-10390.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_LOTJA2.473e-10390.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CICAR3.230e-10393.19NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_AETCO3.230e-10392.67NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_DIOEL5.510e-10391.24NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_DAUCA1.228e-10290.82NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_PANGI1.603e-10290.31NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_FAGEA2.094e-10291.10NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_AMBTC2.094e-10289.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_SORBI2.315e-10190.16NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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