DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2919 contig Csv1_Contig2919:612..1314. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_PHYPA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Physcomitrella patens GN=ndhH PE=3 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 5.337e-98
Identity = 170/198 (85.86%), Postives = 185/198 (93.43%), Query Frame = 3
Query:  108 ILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +LAT+ +   MIV+MGPHHPSMHGVLRLIVTLDGE+VIDCEPILG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI+VPKRASYIR+IMLELSR+ASHLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHNYFRIGGVA DLPYGWIDKCLDFCDYFL  V EY++ IT NPI
Sbjct:    1 MLATKTKP--MIVSMGPHHPSMHGVLRLIVTLDGENVIDCEPILGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPEKLTNIQVPKRASYIRMIMLELSRVASHLLWLGPFMADIGAQTPFFYILREREMIYDLFEAATGMRMMHNYFRIGGVAVDLPYGWIDKCLDFCDYFLPKVNEYERLITNNPI 196          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CHAGL (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Chaetosphaeridium globosum GN=ndhH PE=3 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 5.337e-98
Identity = 165/193 (85.49%), Postives = 183/193 (94.82%), Query Frame = 3
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ + MIV+MGPHHPSMHGVLRL+V+LDGE+VIDC+P+LG+LHRGMEKIAENR+I+QYLPYVTRWDYLATMFTEAITVN PE+L NI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE+VYDLFE+ATGMRMMHNYFRIGGVA DLPYGW+DKCLDFCDYFL  +AEY+  IT NPI
Sbjct:    4 KKTDPMIVSMGPHHPSMHGVLRLVVSLDGENVIDCDPVLGYLHRGMEKIAENRSIVQYLPYVTRWDYLATMFTEAITVNAPEKLANIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREMVYDLFESATGMRMMHNYFRIGGVAVDLPYGWLDKCLDFCDYFLPKIAEYENLITNNPI 196          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CHAVU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Chara vulgaris GN=ndhH PE=3 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.028e-97
Identity = 165/188 (87.77%), Postives = 179/188 (95.21%), Query Frame = 3
Query:  138 MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            MIV+MGPHHPSMHGVLRLI+TLDGE+VIDCEP+LG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+N PE+L NI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYI RERE++YDLFE+ATGMRMMHNYFRIGGVA DLPYGWIDKCLDFC+YFL  V EY+  IT+NPI
Sbjct:    9 MIVSMGPHHPSMHGVLRLIITLDGENVIDCEPVLGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINAPEKLANIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYILREREMIYDLFESATGMRMMHNYFRIGGVAVDLPYGWIDKCLDFCEYFLPKVNEYENLITQNPI 196          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_NEPOL (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nephroselmis olivacea GN=ndhH PE=3 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 5.901e-97
Identity = 163/194 (84.02%), Postives = 182/194 (93.81%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E + + MIV+MGPHHPSMHGVLRLIVTLDGE+V+DCEP++G+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI VP+RASY+RVIMLELSRIASHLLWLGPFMAD+GAQTPFFYI RERE++YDLFEAATGMRMMHNYFR+GGVAAD+PYGWIDKCLDFC+YFL  V EY+  ITRNPI
Sbjct:    3 EAKTDPMIVSMGPHHPSMHGVLRLIVTLDGENVLDCEPVVGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPERLANIEVPRRASYLRVIMLELSRIASHLLWLGPFMADLGAQTPFFYILREREMIYDLFEAATGMRMMHNYFRVGGVAADVPYGWIDKCLDFCEYFLPKVDEYEALITRNPI 196          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ZYGCR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Zygnema circumcarinatum GN=ndhH PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.315e-96
Identity = 163/188 (86.70%), Postives = 178/188 (94.68%), Query Frame = 3
Query:  138 MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M+V+MGPHHPSMHGVLRLIVTLDGE+V DCEP+LG+LHRGMEKIAE+RT +QYLPYVTRWDYLATMFTEAITVN PE+L NI+VPKRASYIR+IMLELSRIASHLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHNYFRIGGVA DLPYGW+DKCLDFCDYFL  V EY++ ITRNPI
Sbjct:    9 MVVSMGPHHPSMHGVLRLIVTLDGENVADCEPVLGYLHRGMEKIAESRTTLQYLPYVTRWDYLATMFTEAITVNAPERLANIQVPKRASYIRMIMLELSRIASHLLWLGPFMADIGAQTPFFYILREREMIYDLFEAATGMRMMHNYFRIGGVAVDLPYGWVDKCLDFCDYFLPKVNEYERLITRNPI 196          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_HUPLU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Huperzia lucidula GN=ndhH PE=3 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.717e-96
Identity = 170/200 (85.00%), Postives = 183/200 (91.50%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++LATEK    MIV+MGPHHPSMHGVLRLIVTLDGE+V +CEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE+L NI+VPKRASYIRVIM ELSRIASHLLWLGPFMADIGAQTPFFYIFRERE +YDLFEAATGMRMMHNYFRIGGVA D PYGW+DKC DFC+Y L  V EY++ ITRNPI
Sbjct:    1 MTMLATEKNP--MIVSMGPHHPSMHGVLRLIVTLDGENVTNCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEKLANIQVPKRASYIRVIMPELSRIASHLLWLGPFMADIGAQTPFFYIFRERETIYDLFEAATGMRMMHNYFRIGGVAVDSPYGWVDKCSDFCNYSLPKVNEYERLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_MESVI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Mesostigma viride GN=ndhH PE=3 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 2.928e-96
Identity = 163/188 (86.70%), Postives = 177/188 (94.15%), Query Frame = 3
Query:  138 MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M+++MGPHHPSMHGVLRLIVTLDGE+VIDCEP+LG+LHR MEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHNYFRIGGVA+DLPYGW+DKCLDF DYFL  V EY++ IT NPI
Sbjct:    9 MVISMGPHHPSMHGVLRLIVTLDGENVIDCEPVLGYLHRAMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPEKLANIEVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYILREREMIYDLFEAATGMRMMHNYFRIGGVASDLPYGWVDKCLDFSDYFLPKVDEYERLITNNPI 196          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ANTFO (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Anthoceros formosae GN=ndhH PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.230e-94
Identity = 164/200 (82.00%), Postives = 182/200 (91.00%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++LA + +   M ++MGPHHPSMHGVLRLIVTLDGE+V DCEPILG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI+VPKRASYIR+IMLELSRIASHLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHN+FRIGGVA DLPYGW+DKCLDFCDYF   V EY++ IT N I
Sbjct:    1 MTMLAAKADP--MTLSMGPHHPSMHGVLRLIVTLDGENVTDCEPILGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPEKLTNIQVPKRASYIRIIMLELSRIASHLLWLGPFMADIGAQTPFFYILREREMIYDLFEAATGMRMMHNFFRIGGVAVDLPYGWVDKCLDFCDYFSLKVDEYERLITYNSI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ADICA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Adiantum capillus-veneris GN=ndhH PE=2 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.152e-92
Identity = 155/188 (82.45%), Postives = 175/188 (93.09%), Query Frame = 3
Query:  138 MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            ++V+MGPHHPSMHGVLRL+V L GE+V+DCE ILG+LHRGMEKIAENRT  QYLPYVTRWDYLATMFTEA+TVN PE+L NI++P+RASYIRVIMLELSRIASHLLWLGPF+ADIGAQTPFFYIFRERE++YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFC Y L  + EY++ +T+NPI
Sbjct:   11 VVVSMGPHHPSMHGVLRLVVALQGENVVDCELILGYLHRGMEKIAENRTTSQYLPYVTRWDYLATMFTEAVTVNAPEKLANIQIPERASYIRVIMLELSRIASHLLWLGPFLADIGAQTPFFYIFREREMIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCQYCLPKIYEYERLVTKNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH1_GLOVI (NAD(P)H-quinone oxidoreductase subunit H 1 OS=Gloeobacter violaceus GN=ndhH1 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 9.749e-92
Identity = 156/200 (78.00%), Postives = 178/200 (89.00%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            MS+L T  E+  M++N+GPHHPSMHGVLRLIVTLDGE+V+DC P+LG+LHR MEKIAE+RTIIQYLPYVTRWDYLATMFTEAITVN PEQL  ++VP+RA YIRVIMLELSRIASHLLWLGPFMADIGA +PFFYIFRERE++YDLFEAATGMRMMHNYFR+GGVA DLPYGW+DK  DFC+Y    + EY++ IT NPI
Sbjct:    1 MSMLETRAER--MVINLGPHHPSMHGVLRLIVTLDGENVVDCVPVLGYLHRSMEKIAESRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLAGVQVPRRARYIRVIMLELSRIASHLLWLGPFMADIGATSPFFYIFREREMIYDLFEAATGMRMMHNYFRVGGVAVDLPYGWVDKARDFCNYLPPKIDEYERLITNNPI 198          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_PHYPA5.337e-9885.86NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CHAGL5.337e-9885.49NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CHAVU2.028e-9787.77NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_NEPOL5.901e-9784.02NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ZYGCR1.315e-9686.70NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_HUPLU1.717e-9685.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_MESVI2.928e-9686.70NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ANTFO1.230e-9482.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ADICA1.152e-9282.45NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH1_GLOVI9.749e-9278.00NAD(P)H-quinone oxidoreductase subunit H 1 OS=Gloe... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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