DN135109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_NEUCR (40S ribosomal protein S29 OS=Neurospora crassa GN=rps-29 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H +VWNS PRTYG GSR+CRVC + +IRKYGL CRQCFR A +IGF K+R Sbjct: 1 MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_MAGGR (40S ribosomal protein S29 OS=Magnaporthe grisea GN=RPS29 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.305e-16 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H +VWNS PRTYG G+R+CRVC + +IRKYGL CRQCFR A +IGFVK+R Sbjct: 1 MSHDSVWNSRPRTYGKGARSCRVCTHRAGLIRKYGLDICRQCFREKAADIGFVKHR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_ICTPU (40S ribosomal protein S29 OS=Ictalurus punctatus GN=rps29 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 3.011e-16 Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGFVK Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_HIPCM (40S ribosomal protein S29 OS=Hippocampus comes GN=rps29 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 3.011e-16 Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGFVK Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_RAT (40S ribosomal protein S29 OS=Rattus norvegicus GN=Rps29 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_PONAB (40S ribosomal protein S29 OS=Pongo abelii GN=RPS29 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_MOUSE (40S ribosomal protein S29 OS=Mus musculus GN=Rps29 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_LYSTE (40S ribosomal protein S29 OS=Lysiphlebus testaceipes GN=RpS29 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MG N+W SHPR YG GSR+CR C N H IIRKYGL CRQCFR A +IGF K Sbjct: 1 MGFENIWFSHPRKYGQGSRSCRSCANKHGIIRKYGLNICRQCFREYASDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_LONON (40S ribosomal protein S29 OS=Lonomia obliqua GN=RpS29 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH+N+W SHPR Y GSR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 1 MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_HUMAN (40S ribosomal protein S29 OS=Homo sapiens GN=RPS29 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54 The following BLAST results are available for this feature:
BLAST of DN135109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135109 ID=DN135109; Name=DN135109; organism=Citrus sinensis; type=EST; length=486bpback to top |