DN135109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_BOVIN (40S ribosomal protein S29 OS=Bos taurus GN=RPS29 PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH ++ SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29A_YEAST (40S ribosomal protein S29-A OS=Saccharomyces cerevisiae GN=RPS29A PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 5.136e-16 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H NVW SHPR YG GSR CRVC + +IRKYGL CRQCFR A +IGF K+R Sbjct: 1 MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_CULQU (40S ribosomal protein S29 OS=Culex quinquefasciatus GN=RpS29 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.951e-15 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MG +++W SHPR YG GSR CR C N H +IRKYGL CRQCFR AK+IGF K Sbjct: 1 MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_DROME (40S ribosomal protein S29 OS=Drosophila melanogaster GN=RpS29 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.329e-15 Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MG + +W SHPR YG GSR CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_CANGA (40S ribosomal protein S29 OS=Candida glabrata GN=RPS29 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.329e-15 Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H NVW SHPR +G GSR CRVC + +IRKY L CRQCFR A +IGF KYR Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29B_YEAST (40S ribosomal protein S29-B OS=Saccharomyces cerevisiae GN=RPS29B PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 4.347e-15 Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H NVW SHPR +G GSR CRVC + ++RKY L CRQCFR A +IGF KYR Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_DICDI (40S ribosomal protein S29 OS=Dictyostelium discoideum GN=rps29 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.678e-15 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 2 Query: 104 VWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 +W +HPR +GPGSR CR CGN H IIRKY L CR+CFR++A+ IGF KYR Sbjct: 5 LWLTHPRNFGPGSRTCRKCGNHHGIIRKYDLNMCRRCFRTDAEAIGFNKYR 55
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_PIG (40S ribosomal protein S29 OS=Sus scrofa GN=RPS29 PE=3 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MG + SHPR +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K Sbjct: 1 MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_DEBHA (40S ribosomal protein S29 OS=Debaryomyces hansenii GN=RPS29 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14 Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H +VW SHPR +G GSR CRVC + +IRKY L CRQCFR A +IGF K+R Sbjct: 1 MAHESVWFSHPRNFGKGSRQCRVCSSHSGLIRKYDLNICRQCFRERASDIGFNKFR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_KLULA (40S ribosomal protein S29 OS=Kluyveromyces lactis GN=RPS29 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.386e-13 Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H NVW SHPR +G GSR CR+ G+ +IRKYGL RQ FR A +IGF KYR Sbjct: 1 MAHENVWYSHPRKFGKGSRQCRISGSHSGLIRKYGLNIDRQSFREKANDIGFYKYR 56 The following BLAST results are available for this feature:
BLAST of DN135109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135109 ID=DN135109; Name=DN135109; organism=Citrus sinensis; type=EST; length=486bpback to top |