DN135103

Overview
NameDN135103
Unique NameDN135103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1053 contig Csv1_Contig1053:274..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_AJECN (Nascent polypeptide-associated complex subunit beta OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18
Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQK-QAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q  Q    G  A    +DDDDE+P+LV
Sbjct:   49 VQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKGEGGEDAKKDDDDDDDEIPDLV 148          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_CHICK (Transcription factor BTF3 homolog 4 OS=Gallus gallus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18
Identity = 46/98 (46.94%), Postives = 69/98 (70.41%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPEL 291
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++L GI++QLG D+L +LRKLA+QF +Q  ++        +++DD+VP+L
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKSEDIDEEDDDVPDL 145          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_COCIM (Nascent polypeptide-associated complex subunit beta OS=Coccidioides immitis GN=EGD1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.204e-17
Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK+D  VI F  PKVQAS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q      G  A    E+DD+++P+LV
Sbjct:   49 VQPIQAIEEVNMFKEDGNVIHFAAPKVQASVPSNTFAIYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKKEGE-AKKEGEEDDEDIPDLV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_ASPOR (Nascent polypeptide-associated complex subunit beta OS=Aspergillus oryzae GN=egd1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.204e-17
Identity = 46/99 (46.46%), Postives = 68/99 (68.69%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q    N   GA   ++DD+D++P+LV
Sbjct:   89 VQPIQAIEEVNMFKEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGAEGKKDDDEDDIPDLV 186          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_NEOFI (Nascent polypeptide-associated complex subunit beta OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17
Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q     AGT     +++D+D++P+LV
Sbjct:   77 VQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKQAGTEG--KKDEDEDDIPDLV 173          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_SCLS1 (Nascent polypeptide-associated complex subunit beta OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q      G       E+DDD++P+LV
Sbjct:   51 VQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKAEGGEEKKDDEEDDDDIPDLV 149          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_ASPFU (Nascent polypeptide-associated complex subunit beta OS=Aspergillus fumigatus GN=egd1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16
Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q     A  GA   +++D+D++P+LV
Sbjct:   80 VQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKQA--GAEGKKDEDEDDIPDLV 176          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BTF3_CAEEL (Transcription factor BTF3 homolog OS=Caenorhabditis elegans GN=icd-1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16
Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  IP  EEVN+ KDD  VI F NPKVQ S+ ANT+ V+G+   K++ ++L GI+NQLGP++L +L+KLA+   K  P+         + +D++VPELV
Sbjct:   55 VTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSADNKQITEMLPGILNQLGPESLTHLKKLANNVTKLGPDG--------KGEDEDVPELV 145          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_PHANO (Nascent polypeptide-associated complex subunit beta OS=Phaeosphaeria nodorum GN=EGD1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQED--DDDEVPELV 294
            V  I   EEVN+FK D  VI F  PKV AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q      G       +D  DDD++PELV
Sbjct:   48 VQPIQAIEEVNMFKSDGNVIHFSAPKVHASVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKEKGEDGDKKDDDDEDDDDIPELV 148          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_ASPNC (Nascent polypeptide-associated complex subunit beta OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16
Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  I   EEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q    N   GA   ++D++D++P+LV
Sbjct:   48 VQPIQAIEEVNMFKEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGADGKKDDEEDDIPDLV 145          
The following BLAST results are available for this feature:
BLAST of DN135103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NACB_AJECN5.611e-1848.00Nascent polypeptide-associated complex subunit bet... [more]
BT3L4_CHICK5.611e-1846.94Transcription factor BTF3 homolog 4 OS=Gallus gall... [more]
NACB_COCIM6.204e-1746.46Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPOR6.204e-1746.46Nascent polypeptide-associated complex subunit bet... [more]
NACB_NEOFI8.103e-1745.45Nascent polypeptide-associated complex subunit bet... [more]
NACB_SCLS11.058e-1644.44Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPFU1.382e-1645.45Nascent polypeptide-associated complex subunit bet... [more]
BTF3_CAEEL1.382e-1646.46Transcription factor BTF3 homolog OS=Caenorhabditi... [more]
NACB_PHANO1.805e-1645.54Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPNC1.805e-1645.45Nascent polypeptide-associated complex subunit bet... [more]

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Properties
Property NameValue
Genbank descriptionwca06c07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06c07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135103 ID=DN135103; Name=DN135103; organism=Citrus sinensis; type=EST; length=619bp
GTGAATGCTATTCCNNNNNNTGAGGAAGTTAACATTTTCAAGGATGACGT
CGTTATTCAGTTCTTAAATCCCAAAGTACAAGCTTCAATTGCTGCCAACA
CATGGGTAGTTAGTGGTGCCCCACAAACCAAGAAGTTGCAGGATATTCTC
GCTGGAATTATCAATCAATTGGGGCCAGATAATTTGGACAACCTGAGGAA
GTTGGCGGACCAGTTTCAGAAGCAAGCACCTAATGCAGGAACTGGTGCAC
CCACGACTCAAGAGGACGACGACGATGAGGTCCCAGAGCTTGTGGCAGGC
GAGACGTTTGAAGCTGCCGCAGAGGAGAAAACAGAGAAACCTGACGCTGC
TTCTTAGAGAGTTTTATCTAGAGGGACTTTGTGTTATTCTATATATTTTC
TATGTTTTTTGAGTTTTTATTTTACTTTTCCGAGTCAACTTTCTCTTGTT
TTATCTGATTCTCCCTGTGACACTAGATATTGTTACTTTTTAATTCAATG
TTTTGCTCCAGTGAAACCAGTGAAAACCCTTTTACTCTTTCAGAATCCAG
AGGCACTGTTGCAATGGCTTTCTATTGTGCATTTTGTTGTNAGTCTGATG
TTGTCGGATCGGTTGCTCT
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