DN135077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_ACECL (Ribulose bisphosphate carboxylase small chain 1 (Fragment) OS=Acetabularia cliftonii GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.774e-17 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 3 Query: 66 YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 Y D RYWTMWKLPMFGC D SQ+L+EIQ C KA+P+AYIR + F+ +Q Q FL+ +P Sbjct: 53 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 112
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_ACEAT (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Acetabularia acetabulum GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.774e-17 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 3 Query: 66 YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 Y D RYWTMWKLPMFGC D SQ+L+EIQ C KA+P+AYIR + F+ +Q Q FL+ +P Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 168
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.624e-17 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 66 YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 Y D RYWTMWKLPMFGC D SQ+L EIQ C KA+P+AYIR + F+ +Q Q FL+ +P Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 168
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 66 YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 Y D RYWTMWKLPMFGC D SQ+L+EIQ C A+P+AYIR + F+ +Q Q FL+ +P Sbjct: 110 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRP 169
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS4_ACEAT (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia acetabulum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 66 YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 Y D RYWTMWKLPMFGC D SQ+L+EIQ C A+P+AYIR + F+ +Q Q FL+ +P Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRP 168
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_BATOE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Batophora oerstedii GN=RBCS PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 33 YVHRENSKMPG-----YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 YV +N+ G Y D RYWTMWKLPMFGC D SQ+L EI C KA+P+AYIR + F+ +Q Q FL+ +P Sbjct: 86 YVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 161
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 3 Query: 66 YYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 Y D RYWTMWKLPMFGC D SQ+L+++Q C KA+P+AYIR + F+ +Q Q FL+ +P Sbjct: 110 YQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICGFLVHRP 169
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_PROHO (Ribulose bisphosphate carboxylase small chain OS=Prochlorothrix hollandica GN=cbbS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 81 YWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 YWTMWKLP+F + ++L E++EC+ YPN YIR + F+N KQ Q +SF++ KP Sbjct: 52 YWTMWKLPLFHATSTQEVLGEVRECRTEYPNCYIRVVGFDNIKQCQSVSFIVHKP 106
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 81 YWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 YWT+WKLP+FG S ++L E+Q C+ YP YIR + F+N KQ Q +SF++ KP Sbjct: 52 YWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GY G + WT+WKLP+FG ++L+EIQ CK+ +PNAYIR +AF++ +Q Q + FL+ KP Sbjct: 34 GYSPAIEFSFTGKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105 The following BLAST results are available for this feature:
BLAST of DN135077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135077 ID=DN135077; Name=DN135077; organism=Citrus sinensis; type=EST; length=490bpback to top |