DN135055

Overview
NameDN135055
Unique NameDN135055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMB (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup B GN=gpxA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.236e-18
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  301 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            +YDF +KD +G  V LS ++GKVLLIVN A+RCGLTP  Y  L  LY +Y  +G EIL FPCNQF  Q P S+ EI +    +F  +F
Sbjct:    3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTP-QYEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKF 89          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMA (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup A GN=gpxA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.236e-18
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  301 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            +YDF +KD +G  V LS ++GKVLLIVN A+RCGLTP  Y  L  LY +Y  +G EIL FPCNQF  Q P S+ EI +    +F  +F
Sbjct:    3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTP-QYEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKF 89          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_BACSU (Glutathione peroxidase homolog bsaA OS=Bacillus subtilis GN=bsaA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.236e-18
Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  298 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            S+Y   V+ I GKD+ L  F GKVL+IVN AS+CG T S   +L  LY+ Y+ +G EIL FPCNQF  QEPG   +I+EF  T +   F
Sbjct:    2 SIYHMKVRTITGKDMTLQPFAGKVLMIVNTASKCGFT-SQLKQLQELYDTYQQEGLEILGFPCNQFMNQEPGEEADIQEFCETNYGVTF 89          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX7_MOUSE (Glutathione peroxidase 7 OS=Mus musculus GN=Gpx7 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.614e-18
Identity = 46/96 (47.92%), Postives = 56/96 (58.33%), Query Frame = 1
Query:  277 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            A A +E+  YDF   +I GK V L K++G V L+VNVAS CG T  NY  L  L        F +LAFPCNQFG QEP +N EI+ FA   +   F
Sbjct:   16 ACAQSEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQNYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDTNREIENFARRTYSVSF 111          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX4_HYLLA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Hylobates lar GN=GPX4 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.753e-18
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1
Query:  298 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFA 540
            S+++F+ K +DG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G   LAFPCNQFG QEPGSN EIKEFA
Sbjct:   40 SMHEFSAKVLDGHTVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRFLAFPCNQFGKQEPGSNEEIKEFA 120          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX7_HUMAN (Glutathione peroxidase 7 OS=Homo sapiens GN=GPX7 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 46/96 (47.92%), Postives = 55/96 (57.29%), Query Frame = 1
Query:  277 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            A A  E+  YDF   +I GK V L K++G V L+VNVAS CG T  +Y  L  L        F +LAFPCNQFG QEP SN EI+ FA   +   F
Sbjct:   17 ACAQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSF 112          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX7_BOVIN (Glutathione peroxidase 7 OS=Bos taurus GN=GPX7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 46/96 (47.92%), Postives = 55/96 (57.29%), Query Frame = 1
Query:  277 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            A A  E+  YDF   +I GK V L K++G V L+VNVAS CG T  +Y  L  L        F +LAFPCNQFG QEP SN EI+ FA   +   F
Sbjct:   16 ACAPREQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSF 111          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BTUE_ECOLI (Vitamin B12 transport periplasmic protein btuE OS=Escherichia coli (strain K12) GN=btuE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  292 EKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            + S+    VKDIDG+   L KF G VLLIVNVAS+CGLTP  Y +L ++ + +  +GF +L FPCNQF  QEPGS+ EIK +  T +   F
Sbjct:    2 QDSILTTVVKDIDGEVTTLEKFAGNVLLIVNVASKCGLTP-QYEQLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTF 91          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAAW (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEE 77          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAAS (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MSSA476) GN=bsaA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEE 77          
The following BLAST results are available for this feature:
BLAST of DN135055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
GPXA_NEIMB1.236e-1852.27Glutathione peroxidase homolog OS=Neisseria mening... [more]
GPXA_NEIMA1.236e-1852.27Glutathione peroxidase homolog OS=Neisseria mening... [more]
BSAA_BACSU1.236e-1850.56Glutathione peroxidase homolog bsaA OS=Bacillus su... [more]
GPX7_MOUSE1.614e-1847.92Glutathione peroxidase 7 OS=Mus musculus GN=Gpx7 P... [more]
GPX4_HYLLA2.753e-1853.09Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX7_HUMAN3.595e-1847.92Glutathione peroxidase 7 OS=Homo sapiens GN=GPX7 P... [more]
GPX7_BOVIN3.595e-1847.92Glutathione peroxidase 7 OS=Bos taurus GN=GPX7 PE=... [more]
BTUE_ECOLI3.595e-1850.55Vitamin B12 transport periplasmic protein btuE OS=... [more]
BSAA_STAAW3.595e-1858.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAS3.595e-1858.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionwca05e09 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05e09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135055 ID=DN135055; Name=DN135055; organism=Citrus sinensis; type=EST; length=565bp
GGGGTACTACAACGATTGATTCACTTAAATTCCATCTCAATGGCTTCTTA
TTCGATGCCTTTCTCTGCAGCTTTCTCCTCACCTTTACGGCATTTCACAC
AAAACAAAACATGCCCTGCTGCATGGGCTTCATCAATGGCGGCTTCATGG
ACTCCTACTAATTCAATCAAATCATCAATTGGGTCCGCTAAACCAGGCTT
TCTTCAACATGGGCTGTTTTCCCAATCTTCAAATTTGCCTGGGTTTTTCG
TGAAACGTCGTTCCTTTGGTGTTCACGCTACAGCTGCTACTGAGAAGTCT
TTATATGACTTCACCGTCAAGGATATTGATGGTAAAGATGTTCCTCTTAG
CAAGTTTAAGGGCAAAGTTCTGTTGATTGTGAATGTCGCTTCAAGATGTG
GCTTGACACCATCTAATTACTCGGAGCTCTCTCACTTATATGAGAAGTAC
AAGACTCAAGGATTTGAGATTCTAGCTTTCCCTTGCAATCAATTTGGTGG
GCAAGAGCCTGGATCAAACCCTGAGATCAAGGAATTCGCTTGTACTAGGT
TTAAGGCAGAATTTC
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