DN135055

Overview
NameDN135055
Unique NameDN135055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13571 contig Csv1_Contig13571:49..613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAAR (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEE 77          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAAN (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain N315) GN=bsaA PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEE 77          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAAM (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=bsaA PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEE 77          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAAC (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain COL) GN=bsaA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEE 77          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_STAES (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.132e-18
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 1
Query:  295 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE 525
            +S+YDF V+  +G+   L ++KG V+LIVN AS CG TP  +  L  LY++YK Q F IL FPCNQFGGQEPGS  E
Sbjct:    2 ESIYDFVVQKNNGESYKLEQYKGDVMLIVNTASECGFTPQ-FEGLQKLYDEYKDQRFIILGFPCNQFGGQEPGSGEE 77          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX8_BOVIN (Probable glutathione peroxidase 8 OS=Bos taurus GN=GPX8 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  298 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            S Y F VKD +G+ V L KFKGKV L+VNVAS C LT  NY  L  L++++    F +LAFPCNQFG  EP  + E+  FA   F   F
Sbjct:   46 SFYTFEVKDANGRVVSLEKFKGKVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEVVSFARNNFGVTF 134          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX1_CHLRE (Glutathione peroxidase 1, mitochondrial OS=Chlamydomonas reinhardtii GN=GPX PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  268 GVHATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTR 549
            G   T++T  + +  +  DID K+V       +V+L+VNVAS+ GLT +NY E + L  KY      I+AFPCNQFGGQEPG+N EIK FA  R
Sbjct:   33 GSKPTSSTS-NFHQLSALDIDKKNVDFKSLNNRVVLVVNVASKUGLTAANYKEFATLLGKYPATDLTIVAFPCNQFGGQEPGTNAEIKAFASAR 125          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: BSAA_BACHD (Glutathione peroxidase homolog bsaA OS=Bacillus halodurans GN=bsaA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  298 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            S+++F+ + I+G++  LS +K +VLLIVN AS+CGLTP  Y EL  LYE YK QGF +L FP NQF  QEPG + EI  F    +   F
Sbjct:    2 SIHEFSARLINGEEKALSDYKDQVLLIVNTASKCGLTPQ-YEELQILYETYKDQGFTVLGFPSNQFMNQEPGDHNEIAAFCERNYGVSF 89          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX8_HUMAN (Probable glutathione peroxidase 8 OS=Homo sapiens GN=GPX8 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.043e-17
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  298 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            S Y F VKD  G+ V L K+KGKV L+VNVAS C LT  NY  L  L++++    F +LAFPCNQFG  EP  + E++ FA   +   F
Sbjct:   46 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTF 134          
BLAST of DN135055 vs. ExPASy Swiss-Prot
Match: GPX8_MOUSE (Probable glutathione peroxidase 8 OS=Mus musculus GN=Gpx8 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.975e-17
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1
Query:  298 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEF 564
            S Y F VKD  G+ V L KFKGK  L+VNVAS C  T  +Y  L  L++++    F +LAFPCNQFG  EP S+ E++ FA   +   F
Sbjct:   46 SFYSFEVKDAKGRTVSLEKFKGKASLVVNVASDCRFTDKSYQTLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESFARQNYGVTF 134          
The following BLAST results are available for this feature:
BLAST of DN135055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
BSAA_STAAR3.595e-1858.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAN3.595e-1858.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAM3.595e-1858.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAC3.595e-1858.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAES6.132e-1855.84Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
GPX8_BOVIN1.046e-1750.56Probable glutathione peroxidase 8 OS=Bos taurus GN... [more]
GPX1_CHLRE1.046e-1747.87Glutathione peroxidase 1, mitochondrial OS=Chlamyd... [more]
BSAA_BACHD1.046e-1750.56Glutathione peroxidase homolog bsaA OS=Bacillus ha... [more]
GPX8_HUMAN3.043e-1748.31Probable glutathione peroxidase 8 OS=Homo sapiens ... [more]
GPX8_MOUSE3.975e-1747.19Probable glutathione peroxidase 8 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionwca05e09 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05e09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135055 ID=DN135055; Name=DN135055; organism=Citrus sinensis; type=EST; length=565bp
GGGGTACTACAACGATTGATTCACTTAAATTCCATCTCAATGGCTTCTTA
TTCGATGCCTTTCTCTGCAGCTTTCTCCTCACCTTTACGGCATTTCACAC
AAAACAAAACATGCCCTGCTGCATGGGCTTCATCAATGGCGGCTTCATGG
ACTCCTACTAATTCAATCAAATCATCAATTGGGTCCGCTAAACCAGGCTT
TCTTCAACATGGGCTGTTTTCCCAATCTTCAAATTTGCCTGGGTTTTTCG
TGAAACGTCGTTCCTTTGGTGTTCACGCTACAGCTGCTACTGAGAAGTCT
TTATATGACTTCACCGTCAAGGATATTGATGGTAAAGATGTTCCTCTTAG
CAAGTTTAAGGGCAAAGTTCTGTTGATTGTGAATGTCGCTTCAAGATGTG
GCTTGACACCATCTAATTACTCGGAGCTCTCTCACTTATATGAGAAGTAC
AAGACTCAAGGATTTGAGATTCTAGCTTTCCCTTGCAATCAATTTGGTGG
GCAAGAGCCTGGATCAAACCCTGAGATCAAGGAATTCGCTTGTACTAGGT
TTAAGGCAGAATTTC
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