DN134957

Overview
NameDN134957
Unique NameDN134957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5436 contig Csv1_Contig5436:302..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN134957 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 2 
Query:   14 AREKAEKEGFEXXVVKTSFKANTKALSENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 304
            + E+ ++EG E  V K  F AN++A +  + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HA PTLSE   E   AA
Sbjct:  405 SEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501
[Close]
BLAST of DN134957 vs. ExPASy Swiss-Prot
Match: DLDH_CANFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Canis familiaris GN=DLD PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 2 
Query:   14 AREKAEKEGFEXXVVKTSFKANTKALSENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 304
            + E+ ++EG E  V K  F AN++A +  + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HA PTLSE   E   AA
Sbjct:  405 SEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501
[Close]
BLAST of DN134957 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 2 
Query:   20 EKAEKEGFEXXVVKTSFKANTKALSENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 304
            +KA++ G +  +    F AN++A +  + +GL K+I   +   +LGVH+ G  A +LI EA+ A+  G   +D+    HA PTLSE   E   AA
Sbjct:  409 QKAKESGIKYRIGTFPFSANSRAKTNMDADGLVKVIVDAETDRLLGVHMIGPMAGELIGEATLALEYGASAEDVARVCHAHPTLSEATKEAMMAA 503
The following BLAST results are available for this feature:
BLAST of DN134957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DLDH_CRIGR7.446e-1135.05Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
DLDH_CANFA7.446e-1135.05Dihydrolipoyl dehydrogenase, mitochondrial OS=Cani... [more]
DLDH_SCHPO9.725e-1135.79Dihydrolipoyl dehydrogenase, mitochondrial OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionwca03h08 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03h08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134957 ID=DN134957; Name=DN134957; organism=Citrus sinensis; type=EST; length=511bp
GGGCGAGCCTCNNGCAAGGGAAAAGGCTGAAAAGGAGGGATTTGAANNNN
TTGTAGTGAAGACAAGCTTCAAAGCTAACACCAAGGCCTTATCAGAAAAC
GAAGGGGAGGGACTTGCTAAGTTAATATACAGACCAGACAACGGTGAGAT
TCTTGGAGTTCATATCTTTGGGCTGCATGCTGCAGACCTTATCCATGAAG
CATCTAATGCTATTGCATTAGGCACACGTATTCAGGACATAAAATTTGCG
GTTCATGCACGTCCAACTCTCTCTGAAGTTCTAGACGAACCGTTTAAAGC
AGCAAAGGTTAAAGATCATGCTTCTAATCCAGTAAGTGAACCAGTTGCAG
TCTAAAGCATCTCAACACTTGGGAAATATTAAATTTTGAAGAAATTTGCT
TGTGCTAGGGAGTACCAAGGAATTTTGCATCCTCAAAGAGAACTAATCAA
CACAGTGACCGTCCTATCAAACCAAACCTGGTGAAGAAATTTGCTGATGT
TTATATGACAT
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