DN134946

Overview
NameDN134946
Unique NameDN134946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 1.651e-66
Identity = 124/144 (86.11%), Postives = 136/144 (94.44%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct:    6 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 251.521 bits (641), Expect = 2.816e-66
Identity = 121/144 (84.03%), Postives = 137/144 (95.14%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG IDFPEFL +MARKM+DTD+EEE++EAF+VFDKD NG+ISAAELRHVMT+LGEKLT+EEVDEMIREAD+DGDGQ+NY+EFVK+M+ +
Sbjct:    8 TEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMMIVR 151          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 3.678e-66
Identity = 123/141 (87.23%), Postives = 135/141 (95.74%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 424
            T  QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMI+EVDADGNGTIDFPEFL LMARKMK+TD E+EL+EAF+VFDKD NGFISAAELRHVMTNLGEKL++EEVDEMIREADVDGDGQ+NYEEFV++M
Sbjct:    9 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMM 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.678e-66
Identity = 118/144 (81.94%), Postives = 135/144 (93.75%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  QI+EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNPTEAELQDM+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMI+ AD DGDGQ+NYEEFV ++++K
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 4.803e-66
Identity = 117/144 (81.25%), Postives = 136/144 (94.44%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  Q++EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNPTEAEL+DM++E+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct:    6 TEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.825e-65
Identity = 123/144 (85.42%), Postives = 131/144 (90.97%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  QI+EFKEAFSLFDKDGDG ITT ELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDF EFL +MA+KMKDTD+EEE+KEAF+VFDKD NGFISA ELRHVM NLGEKLTDEEVDEMIREAD+DGD QINY EFVK+MM K
Sbjct:   12 TEEQIAEFKEAFSLFDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTDNEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQINYTEFVKMMMQK 155          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.384e-65
Identity = 119/141 (84.40%), Postives = 134/141 (95.04%), Query Frame = 2
Query:   11 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            QI+EFKEAFSLFD+DGDGCITT ELGTVMRSLGQNPTEAELQDM+ EVDADG+GTIDFPEFL+LMARKM+D+DSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMI+EAD + DGQ+NYEEFV++M  K
Sbjct:    9 QIAEFKEAFSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMTEK 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 4.066e-65
Identity = 120/144 (83.33%), Postives = 135/144 (93.75%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 247.669 bits (631), Expect = 4.066e-65
Identity = 120/144 (83.33%), Postives = 135/144 (93.75%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of DN134946 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 4.066e-65
Identity = 120/144 (83.33%), Postives = 135/144 (93.75%), Query Frame = 2
Query:    2 TAGQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 433
            T  Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
The following BLAST results are available for this feature:
BLAST of DN134946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
CALM_PARTE1.651e-6686.11Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALM_DICDI2.816e-6684.03Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_CHLRE3.678e-6687.23Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]
CALL3_RAT3.678e-6681.94Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALL3_HUMAN4.803e-6681.25Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]
CALMF_NAEGR1.825e-6585.42Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]
CALMS_CHICK2.384e-6584.40Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALM_NEUCR4.066e-6583.33Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2[more]
CALM_MAGGR4.066e-6583.33Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4[more]
CALM_COLTR4.066e-6583.33Calmodulin OS=Colletotrichum trifolii PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionwca03g04 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03g04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134946 ID=DN134946; Name=DN134946; organism=Citrus sinensis; type=EST; length=662bp
TACGGCCGGGCAGATCTCCGAGTTTAAAGAAGCCTTCAGCTTGTTCGACA
AGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTATGAGG
TCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCAATGA
AGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTAAACC
TCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAGAG
GCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTGCTGA
ACTGCGTCATGTGATGACAAACCTTGGGGAGAAGCTTACTGATGAGGAAG
TCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCCAGATAAAT
TATGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACTCCACCCAA
CCAAAACTTCCTGGAAAAAGAAGAAATTGGCTGATTAATATAATTGGTTC
CCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAGGTCAAGCT
AAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACTGGAGCAAC
TTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGTGAACATTG
TTTCTGTTAAAT
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