DN134923

Overview
NameDN134923
Unique NameDN134923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.938e-21
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  285 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 617
            ++  AR ++R L+ +  C PI++RL WHDAGTYD       + GG N S+R E E  H AN+GL  AL L + +K K+  +TYADL+QLA   A+E  GGP I    GR D
Sbjct:   13 EITKARRELRSLIANKNCAPIMLRLAWHDAGTYDAQ----SKTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKD 119          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.214e-20
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  267 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 629
            +A   + ++ AR+ +R L+    C P+++RL WH AGT+D +     + GG   +++   EL HAANAGL  A+++++PIK++   ++YAD +QLA   A+E +GGP +P   GR D   P
Sbjct:    9 SAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVS----SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAP 125          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.214e-20
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  267 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 629
            +A   + ++ AR+ +R L+    C P+++RL WH AGT+D +     + GG   +++   EL HAANAGL  A+++++PIK++   ++YAD +QLA   A+E +GGP +P   GR D   P
Sbjct:    9 SAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVS----SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAP 125          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: CCPR2_MAGGR (Putative heme-binding peroxidase OS=Magnaporthe grisea GN=MGG_10368 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.099e-19
Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  270 ASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP 641
            AS P    + R+DI  LL           P+LVRL WH AGTYDK+ +     GG+N A +R+E E    ANAGL NA + ++P+K ++  +TYADL  LA   A+   GGP+IP + GR D +   + P
Sbjct:    2 ASKPGDFDAVRKDIVSLLDQPEYDDGSAGPVLVRLAWHSAGTYDKSTDT----GGSNGAGMRYEAEGGDPANAGLQNARQFLEPVKARHPWITYADLRTLAGVVAVRAMGGPEIPWRAGRTDFADDSRVP 127          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 3
Query:  288 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 629
            ++  R  +R L+    C PI+VRL WH AGT+D       R GG   ++RF+ E  H AN+G+  AL+L+ PI++++  +++AD  QLA   A+E  GGP IP   GR D   P
Sbjct:   16 VEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQ----SRTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQP 125          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 43/114 (37.72%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  288 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 629
            ++ A+  +R  +    C P+++RL WH AGT+D       + GG   +++ + EL H AN GL  A++L++PIK+++  V+YAD +QLA   A+E  GGP++P   GR D   P
Sbjct:   16 IEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKT----KTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEP 125          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  231 NRGYSTVPTTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 629
            ++ Y TV     AA     +  A+  +R L+    C P+++RL WH AGT+D +     R GG   +++   E  HAANAGL  A++L+ PIKD+   ++YAD +QLA   A+E  GGP++P   GR D   P
Sbjct:    3 SKSYPTVSDEYLAA-----VGKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVS----SRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQDKPEP 126          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: CCPR_YARLI (Cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=CCP1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.706e-18
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 3
Query:  342 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 617
            P+L+RL WH +GTY+K+  ++   GG   ++RF+ E  HAAN GLVNA   ++PI +K+  ++  DL+ L   TA++E GGP IP K GRVD
Sbjct:   93 PVLLRLAWHSSGTYNKSDNKFGSSGG---TMRFKPEASHAANNGLVNARNFLKPIHEKFPWISTGDLYTLGGVTAVQELGGPIIPWKRGRVD 181          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: CCPR_USTMA (Cytochrome c peroxidase, mitochondrial OS=Ustilago maydis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 3
Query:  342 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP 641
            P+LVRL WH +GTYDKN       GG+N A++RF  E +H ANAGL  A   ++ I  K+  +TY+DL+ L    AI+E GGPKIP + GR D +  +  P
Sbjct:  137 PVLVRLAWHASGTYDKN----SNTGGSNGATMRFAPESEHGANAGLGAARDFMEKIHQKFPWITYSDLWTLGGVAAIQELGGPKIPWRPGRKDATADKCTP 233          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: CCPR2_YARLI (Putative cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=YALI0D04268g PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 3
Query:  342 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 617
            P+LVRL WH +GTYDK        GG+N A++R+  E K  AN GL NA + ++PIK K+  +TYADL+ LA   AIEE  GPK+P K GR D
Sbjct:   29 PVLVRLAWHASGTYDKATGT----GGSNGATMRYMKEAKDEANNGLENARQFLEPIKAKFPWITYADLWTLAGVVAIEEMDGPKVPWKPGRQD 117          
The following BLAST results are available for this feature:
BLAST of DN134923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
APX3_ARATH9.938e-2145.95L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX1_ORYSJ2.214e-2038.02L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI2.214e-2038.02L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
CCPR2_MAGGR1.099e-1941.54Putative heme-binding peroxidase OS=Magnaporthe gr... [more]
APX1_ARATH5.453e-1940.35L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX1_PEA1.215e-1837.72L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX2_ORYSJ1.587e-1838.35L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
CCPR_YARLI2.706e-1846.74Cytochrome c peroxidase, mitochondrial OS=Yarrowia... [more]
CCPR_USTMA7.875e-1846.53Cytochrome c peroxidase, mitochondrial OS=Ustilago... [more]
CCPR2_YARLI7.875e-1851.61Putative cytochrome c peroxidase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionwca03d03 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03d03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134923 ID=DN134923; Name=DN134923; organism=Citrus sinensis; type=EST; length=642bp
TACGGCCGGGGNNNCAACAGATACGACTGCAATCAAAATCACAATCACCG
ATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCTTTGCTCCAC
CACCGCCGCCGCCGCAGCTGCTAAGCTTTCTTTCTCTTCCGCTTCTTCAC
TCTCTTTCTCTCTCTCCTCTTCTTCCTCCCTCAAATGCCTCAAATTCTCT
CCTCTCATCAGCCAGAGGAGATCGTCTGTGAACAGAGGATATAGCACCGT
ACCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGTTGAAGAGTGCTA
GAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGCCATCCTATTTTG
GTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAACATTGAGGA
GTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTGAGGTTGAGC
TAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTGAAACTGATTCAA
CCTATCAAGGACAAATATTCCGGTGTCACATATGCAGACTTATTCCAGTT
GGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTAAGATCCCAATGA
AGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCTG
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