DN134908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPD_NEUCR (ATP synthase subunit delta, mitochondrial OS=Neurospora crassa GN=atp-16 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.772e-16 Identity = 44/131 (33.59%), Postives = 77/131 (58.78%), Query Frame = 3 Query: 219 SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 608 ++ K+ ++ LP+ + +++V V +PA +G+MGVL HVP+I +LKPG++ V + K+YF+S GFA + P S I AVE ++ V+ +AE + +S + + AEAQ+ ++V +L Sbjct: 30 AVADKIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGSQQDIAEAQVELEVLESL 160
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPD_RAT (ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus GN=Atp5d PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 213 PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 608 P + P +++ F P V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++ +S ++A E V +D +D + L + +LS A + +AE QI ++ + AL Sbjct: 31 PAAGPGQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEAL 163
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPD_HUMAN (ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 225 PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 608 P++++ F P + V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++ +S ++A EAV +D +D + L + +L + +AE QI ++ + AL Sbjct: 35 PNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEAL 163
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPD_SCHPO (ATP synthase subunit delta, mitochondrial OS=Schizosaccharomyces pombe GN=atp16 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 231 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 608 KL ++ LPY + V V +PA G+MG+L HVP I LKPGV+SV D + K KYF+S GFA P++ I EA ++ S+ + L + +++S+ + AEA + V V +L Sbjct: 30 KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSKYFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNSSDEGV-AAEAAVRVSVLESL 155
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPD_CAEEL (ATP synthase subunit delta, mitochondrial OS=Caenorhabditis elegans GN=F58F12.1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13 Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 225 PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 608 P +L + F P + S V V VP G +GVL HVPTI LKPGV+SV T ++ FVSSG ++ + ++A E + +++ID S + L + Q+ S +++ +AEAQI +V AL Sbjct: 28 PEELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQRLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAEL-DAAQRASGEGSEVARAEAQIRAEVAEAL 155
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPE_OLTVI (ATP synthase epsilon chain, chloroplastic OS=Oltmannsiellopsis viridis GN=atpE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 3 Query: 279 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 578 KEVD +I+P +TGQMGVL H P I L GV+ V D + V GFA + N + ++ EA + IDP ++ A Q L AT EK EA Sbjct: 17 KEVDEIILPTNTGQMGVLSNHAPLITALDIGVMLVRTQKDWESVAVMGGFALVKQNQIT-VLVNEAESKETIDPQEAEEAFATAKQTLEQATGQKEKVEA 115
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPE_MAGSA (ATP synthase epsilon chain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 231 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHPNSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 578 K+ V P A L + +VDMV+VP + G G L H P I ++PGV+ +HDG + FV+ GFA ++ + ++A EA+P+ ++ + + + L A +D +KA A Sbjct: 4 KIQFELVSP-AKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVSSSVFVAGGFAEVNEERIT-VLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHA 118
BLAST of DN134908 vs. ExPASy Swiss-Prot
Match: ATPE_RHOCS (ATP synthase epsilon chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 35/106 (33.02%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 270 LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT---KKYFVSSGFAFIHPNSVADIIAVEAVPIDQI---DPSLVQKGLAEFNQKLSSATTDLEK 569 L ++ V MV+VP + G GVLPGH P I ++PG++ V+ N T ++ FV+ GFA + ++ ++A EA +D + D + ++K +++ + + AT+D+E+ Sbjct: 16 LVSQPVAMVVVPGADGLFGVLPGHAPMIVTVRPGIIDVYGDNQTTVSRRIFVAGGFAEV-TDTRCTVLAEEASDLDALLKSDTAALEKQISDLREDIEDATSDVER 120 The following BLAST results are available for this feature:
BLAST of DN134908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DN134908 ID=DN134908; Name=DN134908; organism=Citrus sinensis; type=EST; length=679bpback to top |