DN134883

Overview
NameDN134883
Unique NameDN134883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length411
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_AETGR (Photosystem II reaction center protein I OS=Aethionema grandiflora GN=psbI PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.274e-14
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_AETCO (Photosystem II reaction center protein I OS=Aethionema cordifolium GN=psbI PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.274e-14
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_ACOCL (Photosystem II reaction center protein I OS=Acorus calamus GN=psbI PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.274e-14
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_ACOAM (Photosystem II reaction center protein I OS=Acorus americanus GN=psbI PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.274e-14
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_SILLA (Photosystem II reaction center protein I OS=Silene latifolia GN=psbI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.621e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRE+
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRED 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_PIPCE (Photosystem II reaction center protein I OS=Piper cenocladum GN=psbI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.621e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRE+
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRED 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_ORYSJ (Photosystem II reaction center protein I OS=Oryza sativa subsp. japonica GN=psbI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.621e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR+E
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRDE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_ORYSI (Photosystem II reaction center protein I OS=Oryza sativa subsp. indica GN=psbI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.621e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR+E
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRDE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_ORYSA (Photosystem II reaction center protein I OS=Oryza sativa GN=psbI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.621e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR+E
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRDE 36
[Close]
BLAST of DN134883 vs. ExPASy Swiss-Prot
Match: PSBI_ORYNI (Photosystem II reaction center protein I OS=Oryza nivara GN=psbI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.621e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:   48 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 155
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR+E
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRDE 36
The following BLAST results are available for this feature:
BLAST of DN134883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PSBI_AETGR7.274e-14100.00Photosystem II reaction center protein I OS=Aethio... [more]
PSBI_AETCO7.274e-14100.00Photosystem II reaction center protein I OS=Aethio... [more]
PSBI_ACOCL7.274e-14100.00Photosystem II reaction center protein I OS=Acorus... [more]
PSBI_ACOAM7.274e-14100.00Photosystem II reaction center protein I OS=Acorus... [more]
PSBI_SILLA1.621e-1397.22Photosystem II reaction center protein I OS=Silene... [more]
PSBI_PIPCE1.621e-1397.22Photosystem II reaction center protein I OS=Piper ... [more]
PSBI_ORYSJ1.621e-1397.22Photosystem II reaction center protein I OS=Oryza ... [more]
PSBI_ORYSI1.621e-1397.22Photosystem II reaction center protein I OS=Oryza ... [more]
PSBI_ORYSA1.621e-1397.22Photosystem II reaction center protein I OS=Oryza ... [more]
PSBI_ORYNI1.621e-1397.22Photosystem II reaction center protein I OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionwca02g01 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02g01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134883 ID=DN134883; Name=DN134883; organism=Citrus sinensis; type=EST; length=411bp
CTATTCTCTTTTTCCTTTCCCCAAAAACCTGATTTGGAGATTGTGTAATG
CTTACTCTCAAACTCTTTGTTTACACCGTAGTGATATTCTTTGTTTCGCT
CTTCATCTTCGGATTCCTGTCTAATGATCCAGGGCGTAATCCCGGACGCG
AAGAATAAAAAAGGAAGGAGTTGCTTACTTTATTCGTATAAACGTTCTTA
GGATTTTTTGATTCCCAGTTACTATTAAAAATAAAGTAAAAGTGTTCGCT
AAAGTTAAATTTGAAAAATACCAAGCCATCGCCCGAAACGGAAAGAGAGG
GATTCGAACCCTCGGTACGAAGAACTCGTACACCGGATTAGCAATCCGAC
GCTTTAATCCACTCAGCCATCTCTCCTAATTGAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
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