DN134865

Overview
NameDN134865
Unique NameDN134865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.357e-84
Identity = 151/188 (80.32%), Postives = 167/188 (88.83%), Query Frame = 1
Query:   94 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ REHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  + FVPISG+ GDNM+
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 188          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.445e-83
Identity = 154/202 (76.24%), Postives = 172/202 (85.15%), Query Frame = 1
Query:   52 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            MGKEK HIN+VVIGHVDSGKSTTTGHLIYKLGGIDKR IE+FEKE++EM K SFKYAWVLDKLKAERERGITIDIALW+FET KY+ TVIDAPGHRDFIKNMITGTSQAD A+L++ +    FE   SK+GQ REHALLAFTLGV+QMI   NKMD  T +Y ++R+DEI  EV  YLKKVGYN +KIPFV ISGF GDNM+
Sbjct:    1 MGKEKTHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRTIEKFEKESSEMGKGSFKYAWVLDKLKAERERGITIDIALWQFETPKYHYTVIDAPGHRDFIKNMITGTSQADVALLVVPADR--FEGAFSKEGQTREHALLAFTLGVRQMIVGINKMD--TCEYKQSRFDEIFNEVDGYLKKVGYNTEKIPFVAISGFVGDNMV 198          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 6.968e-81
Identity = 149/202 (73.76%), Postives = 167/202 (82.67%), Query Frame = 1
Query:   52 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            M KEK H+N+VVIGHVDSGKST+TGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALW FET K   T+IDAPGHRDFIKNMITGTSQAD A+LII S  G FEAGISK+GQ REHALLAFT+GVKQMI   NKMD  +  + + R+ EI KE+S YLKK+   P + PF+PISG+ GDNM+
Sbjct:    1 MPKEKNHLNLVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWNFETAKSVFTIIDAPGHRDFIKNMITGTSQADAAILIIASGQGEFEAGISKEGQTREHALLAFTMGVKQMIVAVNKMDDKSVNWDQGRFIEIKKELSDYLKKIWLQPRQDPFIPISGWHGDNML 202          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 5.899e-80
Identity = 135/198 (68.18%), Postives = 167/198 (84.34%), Query Frame = 1
Query:   61 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNM 654
            +K H+NIV+IGHVDSGKSTTTGHLIYK GG D R +E+ E  AA++ K SFK+AW+LDKLKAERERGITIDI+LWKF+T ++  T+IDAPGHRDFIKNMITGTSQAD A+L++ + TG FEAG+S++GQ REHALLA+T+GVKQ+I C NKMD T P YS  R+DE+V+ V  YLKK+GYNP  IPFVP+SG+ G+N+
Sbjct:    7 QKTHLNIVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKSSFKFAWILDKLKAERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDLTDPPYSHKRFDEVVRNVMVYLKKIGYNPATIPFVPVSGWTGENI 204          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.928e-79
Identity = 148/204 (72.55%), Postives = 167/204 (81.86%), Query Frame = 1
Query:   52 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYN--PDKIPFVPISGFEGDNMI 657
            MGKEK HIN+VVIGHV +GKSTTTGHLIY  GGIDKR IERFE+    + K SFKYAWVL K+KAERERGITIDI+LWKFET K + T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAG SK+GQ REHALLA TLGVKQMI CCNKMD  +  YS+ARY EI  E++S+L KVGY    ++IPF+PISGF GDNMI
Sbjct:    1 MGKEKPHINLVVIGHVVAGKSTTTGHLIYACGGIDKRTIERFEEGGQRIGKGSFKYAWVLAKMKAERERGITIDISLWKFETRKDFFTIIDAPGHRDFIKNMITGTSQADVAILVIASGAGEFEAGYSKNGQTREHALLANTLGVKQMIVCCNKMDDKSVNYSEARYKEIKNEMTSFLTKVGYAKVEERIPFIPISGFNGDNMI 204          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.587e-69
Identity = 118/202 (58.42%), Postives = 157/202 (77.72%), Query Frame = 1
Query:   52 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            M ++K HIN+VVIGHVD GKST  GHL+Y+LG +D++ I+  E+EA +  K SFKYAW+LD+LK ERERG+TID+   KFET KYY T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQ REH +LA T+G+ Q+I   NKMDAT P YSK RY++IV  +  ++K +GY  D+IPF+P+S + G+N+I
Sbjct:    1 MSQQKPHINLVVIGHVDHGKSTLVGHLLYRLGFVDEKTIKMLEEEAKKKGKESFKYAWLLDRLKEERERGVTIDLTFVKFETKKYYFTIIDAPGHRDFVKNMITGASQADAAILVVSARRGEFEAGMSAEGQTREHLILAKTMGIDQLIVAVNKMDATEPPYSKQRYEQIVAFLKKFMKSLGYKVDQIPFIPVSAWTGENLI 202          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.037e-68
Identity = 118/200 (59.00%), Postives = 156/200 (78.00%), Query Frame = 1
Query:   58 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            KEK H+N++VIGHVD GKST  GHL+Y+LG +D++ ++  E+EA +  K SFKYAW+LDKLK ERERG+TID+   KFET KYY T+IDAPGHRDFIKNMITG SQAD A+L++ +  G FEAG+S +GQ REH LLA T+G+ Q+I   NKMDAT P +S+ RY +IV+ +  ++K +G+  D+IPFVP+S + GDN+I
Sbjct:    4 KEKPHMNLIVIGHVDHGKSTLVGHLLYELGFVDEKTLKMLEEEAKKRGKESFKYAWLLDKLKEERERGVTIDLTFMKFETPKYYFTIIDAPGHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPFVPVSAWTGDNII 203          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 3.966e-68
Identity = 125/200 (62.50%), Postives = 160/200 (80.00%), Query Frame = 1
Query:   58 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            KEK H+N+VVIGHVDSGKSTTTGHLIYKLGGID+R + + E++A E+NK SFKYA+VLD LKAE+ERGITI+ AL +F+T     T+IDAPGH+DFIKNMITGTSQAD AVLII +  G FE G S++G  ++HALLA+T+G+KQ I   NKMD  T  Y + R++EIV+ VS +L K+GY  + + ++PISGF+GDNM+
Sbjct:    4 KEKDHLNLVVIGHVDSGKSTTTGHLIYKLGGIDERTLAKLEEKALELNKASFKYAFVLDNLKAEQERGITINCALRQFDTPSRSYTIIDAPGHKDFIKNMITGTSQADAAVLIIAAKKGEFEDGFSREGSTKDHALLAYTMGIKQAIVAINKMD--TIDYDEERFNEIVENVSDHLGKIGYKKENVKYIPISGFDGDNML 201          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.154e-67
Identity = 139/232 (59.91%), Postives = 161/232 (69.40%), Query Frame = 1
Query:   52 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPK----YSKARYDEIVKEVSSYLKKVGYNP------------------DK--------IPFVPISGFEGDNMI 657
            MGKEK HIN+VVIGHVD+GKSTTTGHLIYKLGGID R I +FE +A EM K SFKYAWVLDKLKAERERGITIDIALWKF T K+  TVIDAPGHRDFIKNMITGTSQAD A+L+ID     FEAGI++ G  +EHALLA+TLGVKQ+    NKMD    K    +++ RY+E+V  +   L K+G+                    DK          FVPISG+ GDNM+
Sbjct:    1 MGKEKTHINLVVIGHVDAGKSTTTGHLIYKLGGIDARTIAKFEADAKEMGKSSFKYAWVLDKLKAERERGITIDIALWKFSTAKFEYTVIDAPGHRDFIKNMITGTSQADVALLVIDGNN--FEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIGFKKKDKGDKKKGDKKEKKDKKDKGEKKYVCSATFVPISGWTGDNML 230          
BLAST of DN134865 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 5.727e-67
Identity = 113/199 (56.78%), Postives = 157/199 (78.89%), Query Frame = 1
Query:   61 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQAREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMI 657
            +K H+NIV+IGHVD GKST TGH++Y+LG  D++ ++  E+E+ +M K SFK+AW+LD++K ERERG+TI ++  KFET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQ REHA+LA T+G+ Q+I   NKMDAT P YS+ RY+EI + +  +LK +GY+  KIPF+PIS + G+N+I
Sbjct:    5 QKPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSAEGQTREHAILARTMGINQLIVAINKMDATEPPYSEKRYNEIKEILGKFLKGLGYDVSKIPFIPISAWTGENLI 203          
The following BLAST results are available for this feature:
BLAST of DN134865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_ADIBE1.357e-8480.32Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A_CRYPV7.445e-8376.24Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1A_STYLE6.968e-8173.76Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A1_XENLA5.899e-8068.18Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_BLAHO2.928e-7972.55Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A_HYPBU3.587e-6958.42Elongation factor 1-alpha OS=Hyperthermus butylicu... [more]
EF1A_IGNH43.037e-6859.00Elongation factor 1-alpha OS=Ignicoccus hospitalis... [more]
EF1A2_EUPCR3.966e-6862.50Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1AS_PORPU1.154e-6759.91Elongation factor 1-alpha S OS=Porphyra purpurea G... [more]
EF1A_DESMO5.727e-6756.78Elongation factor 1-alpha OS=Desulfurococcus mobil... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca02e01 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02e01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134865 ID=DN134865; Name=DN134865; organism=Citrus sinensis; type=EST; length=664bp
CGGCCGGGGGGTTTTAGCAGAGCTCTTTCAGTTTTAAGCAAATACTTTAT
CATGGGCAAGGAGAAGTTTCATATCAATATTGTGGTTATTGGCCATGTCG
ACTCTGGGAAGTCAACCACCACCGGTCACTTGATCTACAAGCTTGGAGGT
ATTGACAAGCGTGTGATTGAGCGGTTTGAGAAGGAAGCTGCTGAGATGAA
CAAGAGATCATTCAAGTACGCATGGGTGCTTGACAAGCTCAAGGCTGAGC
GTGAGCGTGGTATCACCATTGATATTGCTTTGTGGAAGTTCGAGACCACA
AAGTACTACTGCACTGTCATCGATGCCCCCGGACATCGTGACTTTATTAA
GAACATGATTACCGGTACTTCTCAGGCTGATTGTGCTGTCCTTATCATCG
ACTCCACCACTGGTGGTTTTGAAGCTGGTATCTCTAAGGATGGGCAGGCC
AGAGAGCACGCTCTACTTGCTTTCACCCTTGGTGTGAAGCAAATGATTTG
TTGCTGTAACAAGATGGATGCCACCACTCCCAAGTATTCAAAGGCAAGAT
ATGATGAAATTGTTAAGGAAGTCTCTTCCTACTTGAAGAAGGTTGGCTAC
AACCCAGATAAGATTCCATTTGTCCCAATCTCTGGATTTGAGGGTGATAA
CATGATTGANNGGT
back to top