DN134862

Overview
NameDN134862
Unique NameDN134862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11516 contig Csv1_Contig11516:30..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  164 TIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAV 673
            T+P++G G A    G + +  + +V  A+E+G R  DTAA Y +E  +G AIA +   G+   R ELF+T+K+            A + SL  LGL+++DLYLIH+P    P  G            Y   +  + + +  G T+SIGVSNF  + +  ++    + PAV
Sbjct:   19 TMPVLGMGVA----GLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPA---PAAG-----------KYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAV 165          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: KAR_YEAST (NADPH-dependent alpha-keto amide reductase OS=Saccharomyces cerevisiae GN=YDL124W PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 2
Query:  149 GSTGKTIPLVGFGTAQFPF----GAATEAVKESVVHAIEV-GYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAV 673
            G+    I ++G GT  +         + ++ E +V+A+++ G  H D A IY++   +G+A++        K R+ +F+T K              L  +LK +G +++DLYL+H P          F  +++  L  E  W+ ME+    G  K+IGVSNFA + L+R+L  A++ P V
Sbjct:   13 GNKIPAIAIIGTGTRWYKNEETDATFSNSLVEQIVYALKLPGIIHIDAAEIYRTYPEVGKALSLTE-----KPRNAIFLTDKYSPQIKMSDSPADGLDLALKKMGTDYVDLYLLHSP----------FVSKEVNGLSLEEAWKDMEQLYKSGKAKNIGVSNFAVEDLQRILKVAEVKPQV 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  164 TIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAV 673
            T+P++G G A    G + +  + +V  A+E+G R  DTAA Y +E  +G A+A +   G+   R ELF+T+K+            A + SL  LGL+++DLYLIH+P    P  G            Y   +  + + +  G T+SIGVSNF  + +  ++    + PAV
Sbjct:   20 TMPVLGMGVA----GLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRALAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPA---PAVG-----------KYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAV 166          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  128 SIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAV 673
            SIP   L     T+PL+G G A+     + +  + +V+ A+E+G R  DTAA Y +E  +  AIA +   G+   R +LF+T+KL            A   SL  LG++++DLYLIH+P    P  G            Y   W  M + +  G  +SIGV NF  + L  ++    + PAV
Sbjct:    9 SIPSITLNDEN-TMPLLGLGVAEL----SEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GI--PRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPA---PPVG-----------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAV 166          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  128 SIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAV 673
            SIP   L     T+PL+G G A+     + +  + +V+ A+E+G R  DTAA Y +E  +  AIA +   G+   R +LF+T+KL            A   SL  LG++++DLYLIH+P    P  G            Y   W  M + +  G  +SIGV NF  + L  ++    + PAV
Sbjct:    9 SIPSITLNDEN-TMPLLGLGVAEL----SEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GI--PRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPA---PPVG-----------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAV 166          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: YKW2_SCHPO (Uncharacterized oxidoreductase P32A8.02 OS=Schizosaccharomyces pombe GN=SPAP32A8.02 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  152 STGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLAT 652
            + G  IP +GFG     +      V +    A++ GYRH DTAA+Y +E+  G+AI        +K R ++F+TSKL    +       A+++SL +LG  +IDL+LI  P   K        K  I        W+AMEE  + G  +S+GVSN+  K L+ L A+
Sbjct:   14 TNGMVIPRIGFGAFMLKYNECYGLVTQ----ALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVK-RTDIFLTSKL-ANCSDYYSTRAAIRSSLHHLG-TYIDLFLIQSPAGGK--------KSRI------ASWKAMEEFVDSGDIRSVGVSNYGVKHLQELYAS 159          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: DKGB_CORSS (2,5-diketo-D-gluconic acid reductase B OS=Corynebacterium sp. (strain SHS752001) GN=dkgB PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12
Identity = 58/184 (31.52%), Postives = 85/184 (46.20%), Query Frame = 2
Query:  122 MVSIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAV 673
            M +IP   L   G+     G GT    +    +    ++V AI+ GYR  DTA  Y++E  +G A+  +        RDEL + SK+      R   + +++ SL  LGL+ IDL LIH+P    P  G            +   W  M + +  GL +SIGVSNF    L+ L+    + PAV
Sbjct:    1 MPNIPTISLND-GRPFAEPGLGT----YNLRGDEGVAAMVAAIDSGYRLLDTAVNYENESEVGRAVRASS-----VDRDELIVASKIPGRQHGRAEAVDSIRGSLDRLGLDVIDLQLIHWP---NPSVG-----------RWLDTWRGMIDAREAGLVRSIGVSNFTEPMLKTLIDETGVTPAV 160          
The following BLAST results are available for this feature:
BLAST of DN134862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
Y1744_MYCMM3.389e-1432.94Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
KAR_YEAST3.389e-1428.89NADPH-dependent alpha-keto amide reductase OS=Sacc... [more]
Y1987_MYCUA5.781e-1432.35Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
Y1669_MYCLE7.550e-1432.42Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB7.550e-1432.42Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
YKW2_SCHPO2.197e-1334.13Uncharacterized oxidoreductase P32A8.02 OS=Schizos... [more]
DKGB_CORSS1.424e-1231.522,5-diketo-D-gluconic acid reductase B OS=Coryneba... [more]

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Properties
Property NameValue
Genbank descriptionwca02d09 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02d09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134862 ID=DN134862; Name=DN134862; organism=Citrus sinensis; type=EST; length=674bp
GCAAGTGGCGGCCCTTTTGCCCCCTAAGTTATGATATATATACACTCGCG
CATACATAAGTCGGCAGTGCAGCCCCGTGAGCCAAATGCACCTTGATTCC
TCTTCGTTGAAAATGAAAACAATGGTAAGCATCCCAGAGGCTCCTTTGGG
CTCCACCGGCAAAACCATACCTCTTGTTGGCTTCGGCACGGCCCAATTTC
CGTTCGGAGCAGCCACTGAAGCAGTAAAAGAATCCGTTGTGCATGCAATA
GAAGTCGGCTACAGACACTTCGACACCGCCGCAATATACCAGTCCGAGGA
GCCTCTTGGGGAAGCAATAGCCCAAGCGTTGCGTCTTGGGCTCATCAAAT
CACGCGATGAGCTCTTTATCACTTCAAAGCTTTGGTTCGGCCACGCACAC
CGTCAACTTGTCCTCCCTGCGCTACAAACTTCTCTCAAGAATCTGGGATT
GGAGCATATTGATTTGTATCTGATTCATTTTCCGGTAAGCTTGAAGCCTG
GAACAGGGTTCCCATTCAGTAAAGAAGATATTGAGCCACTTGATTATGAG
GGTGTTTGGGAGGCCATGGAGGAGTGTCAAAATCTCGGCCTCACTAAATC
CATTGGAGTCAGCAACTTTGCTTGCAAGAAACTTGAGAGGTTACTTGCTA
CTGCAAAAATCCCTCCTGCTGTCA
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