DN134825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 528 A KR++KE +L KDP A P+ +++F W T+ GP DS + GGV+ I PP+YP +PP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 531 A KR+ KE K + ++PP A P +++ W I GP ++PY G + T+ FP DYPF PP + T + N +CL D + W+P+ +++ +L + S +T Sbjct: 6 AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMT 116
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 531 + KR+ KE K + +PP SA P E++ W I GP +P+ G + + FP +YPF+PP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 1 Query: 247 PPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSHKAXYESTARSW 621 P TSC H + P + Y GG F I PP+Y PP V TKV+HPNIN +GSICL IL++ W P ++ V+ + SL D + +D L + A M+ ++ + R + Sbjct: 53 PSTSC---------LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREY 175
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 32/117 (27.35%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 543 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PF+PP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 32/117 (27.35%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 543 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PF+PP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 32/117 (27.35%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 543 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PF+PP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127 The following BLAST results are available for this feature:
BLAST of DN134825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DN134825 ID=DN134825; Name=DN134825; organism=Citrus sinensis; type=EST; length=624bpback to top |