DN134825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 85/141 (60.28%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPF+PPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++A ++ AR WT Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWT 202
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 85/141 (60.28%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPF+PPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++A ++ AR WT Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWT 202
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 85/141 (60.28%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPF+PPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++A ++ AR WT Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWT 202
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.986e-38 Identity = 65/141 (46.10%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 + KRI +E+ +L DPP CSAGP ++++HW ATI+GPS +PY GG+F + I FP DYPF+PPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P IA +Y + + ++ A+ WT Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWT 177
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.025e-35 Identity = 63/121 (52.07%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 262 SAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 S G + +++ W A I GP +PY GG+F ++I FP DYPF+PPK F+T ++HPNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDPLVPEI ++K+++ ++ AR +T Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFT 148
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35 Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXY 600 A KR++ + K LQKDPP S P ++ HW A I GP D+P+ GG F +T+HF DYP +PP V F +++FHPNI ++GSICLDIL+ QWSP ++ VL SI SLL DPNPD P E A ++ +K Y Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREY 137
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 208 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 +RI+KE + L +P SA P E+M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +KS++A TA+ WT Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWT 146
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.149e-34 Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 208 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 +RI+KE + L +P SA P ++M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +KS++A TA+ WT Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWT 146
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.450e-34 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624 A KR+ KE+ D+ K PP+ CSA V +++ W+AT+ GP SP+ GVF + I P DYPF+PP + F TK++HPNI S+G+IC ++ WSP L I VL +I S+LTDPNPD+PL EIA +K+ + + TA+ WT Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWT 143
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.730e-34 Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXY-----ESTARSWT 624 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP +PP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY +K Y E +SWT Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150 The following BLAST results are available for this feature:
BLAST of DN134825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DN134825 ID=DN134825; Name=DN134825; organism=Citrus sinensis; type=EST; length=624bpback to top |