DN134825

Overview
NameDN134825
Unique NameDN134825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.076e-32
Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 1
Query:  208 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624
            +RI+KE + L  +P     A P   +  ++   I GP DSP+ GG F + +  P +YP   PKV F TK++HPN++  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +K+++A    TAR+WT
Sbjct:    6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWT 144          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.076e-32
Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 1
Query:  208 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624
            KRI+KE + L  DP    +A P  +++ ++Q TI GP  SPY  G+F + ++ P DYP E PKV F TK++HPNI+  G ICLD+LK  WSPAL I  VLLSI +LL  PNP+DPL  ++A  +  ++   ++ AR WT
Sbjct:    6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWT 144          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.405e-32
Identity = 64/139 (46.04%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  208 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624
            +RI+KE + L ++P    +A P   +  ++   + GP+DSP+ GGVF + +  P DYP   PKV F TK++HPNI+  G ICLD+LK++WSPAL I  +LLSI +LL+ PNPDDPL  ++A ++K ++A     AR WT
Sbjct:    6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWT 144          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.405e-32
Identity = 62/141 (43.97%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSW 621
            +S+R+ KE  DL++ P        V +++FHW  T +GPSDS YAGG F  ++ FP DYPF+PP + F T+++HPN +S G++CL ILK+Q + P++ +  VL  I  LL +PNPDDPLV  IA  Y++ +  ++  AR +
Sbjct:    8 SSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDY 148          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32
Identity = 60/146 (41.10%), Postives = 93/146 (63.70%), Query Frame = 1
Query:  202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTAR-----SWT 624
            A +R++++ K +Q+DPP   SA PVA+++  W A I+GP+++P+  G F + + F   YP +PP V F +++FHPN+ S+G +CLDIL+ +WSP   ++ +L S+ SLL DPN   P   E + +YK H+  YE   R     SWT
Sbjct:    5 ARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32
Identity = 59/145 (40.69%), Postives = 95/145 (65.52%), Query Frame = 1
Query:  202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXY-----ESTARSW 621
            A +R++++ K +Q+DPP+  SA P+ +++  W A I+GPSD+P+  G F + + F   YP +PP+V F +++FHPN+ ++G +CLDIL+ +WSP   +S +L S+ SLL DPN   P   E A++YK H++ Y     E+   SW
Sbjct:    5 ARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSW 149          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 9.107e-32
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 1
Query:  205 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXYESTARSWT 624
            S+RI KEL D+Q+D         + +D+ H +    GP  +PY GG F+V I  P DYPF PPK+ F TK++HPN++S  G+ICLDILK+QWSP  T+   L+S+ SLL  P P +P   ++A +Y  +   +  TAR WT
Sbjct:    6 SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWT 146          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.553e-31
Identity = 59/145 (40.69%), Postives = 93/145 (64.14%), Query Frame = 1
Query:  202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXY-----ESTARSW 621
            A +R++++ K +++D P   SA P+ +++  W A I+GP+D+PY  G F + + F  DYP +PP V F +++FHPN+ +NG ICLDIL+ +W+P   ++ +L SI SL  DPNP  P   E A ++K HK+ Y     E+  +SW
Sbjct:    5 ARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.553e-31
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 1
Query:  202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXY-----ESTARSW 621
            A +R++++ K +Q DPP   SA PVA+++  W A I+GP+D+P+  G F + +HF   YP +PP V F +++FHPN+   G +CLDIL+ +WSP   ++ +L SI SLL DPN   P   E +++YK ++  Y     E+  +SW
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149          
BLAST of DN134825 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.029e-31
Identity = 59/145 (40.69%), Postives = 93/145 (64.14%), Query Frame = 1
Query:  202 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFEPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSHKAXY-----ESTARSW 621
            A +R++++ K +Q DPP   SA P+ +++  W A I+GP+D+P+  G F + + F   YP +PP+V F +++FHPN+ +NG +CLDIL+ +WSP   ++ VL SI SLL DPN   P   E +++YK ++  Y     E+  RSW
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRETVERSW 149          
The following BLAST results are available for this feature:
BLAST of DN134825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UBE2N_BOVIN1.076e-3246.76Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN... [more]
UBC13_YEAST1.076e-3247.48Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyce... [more]
UBE2N_DROME1.405e-3246.04Ubiquitin-conjugating enzyme E2 N OS=Drosophila me... [more]
UBC14_SCHPO1.405e-3243.97Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccha... [more]
UBC2_YARLI3.130e-3241.10Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_CANAL3.130e-3240.69Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBC1_SCHPO9.107e-3244.68Ubiquitin-conjugating enzyme E2 1 OS=Schizosacchar... [more]
UBC2_CANGA1.553e-3140.69Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_ASPFU1.553e-3140.69Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_TRIHA2.029e-3140.69Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma h... [more]

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Properties
Property NameValue
Genbank descriptionwca01g09 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01g09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134825 ID=DN134825; Name=DN134825; organism=Citrus sinensis; type=EST; length=624bp
CGGCCGGGGCTCGACGATATTTGTGTTGAAGNAAACGAAGCAAGGGGTTG
ATAGAGGAGCGAGGCGGGGGCGGCTTGACGACCTAGATCTGCTTCACCGT
TTCGCTTTCTCGACGCTATCGCTCTCCGATCCTGTTCTCTGCCGCGCAAG
GTCTTAAGGTTCGTTGTAGTTTCAATTTTAATAATCCCCTGAAGAGTCAT
GGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATTTGCAGAAGGATCCTC
CCACGTCTTGCAGCGCTGGCCCTGTGGCTGAAGACATGTTCCACTGGCAA
GCAACAATTATGGGCCCTTCTGATAGCCCATATGCAGGAGGTGTATTTTT
AGTTACCATTCATTTTCCTCCTGATTATCCTTTCGAGCCCCCAAAGGTTG
CTTTTAGGACCAAGGTCTTCCACCCGAACATCAACAGCAATGGAAGCATC
TGTCTTGATATCCTTAAAGAACAGTGGAGTCCAGCGCTTACCATTTCAAA
GGTCCTGCTCTCTATCTGCTCCTTGCTTACTGATCCAAATCCTGACGACC
CTCTTGTACCGGAGATTGCCCACATGTACAAGTCCCACAAGGCCANATAT
GAATCCACGGCCAGGAGCTGGACA
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