DN134807

Overview
NameDN134807
Unique NameDN134807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 259.996 bits (663), Expect = 8.287e-69
Identity = 130/179 (72.63%), Postives = 148/179 (82.68%), Query Frame = 3
Query:  141 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVGRNKYQIQIPLPPKIDPSVTMMTVEEKPXVTYNDVGGCKEXXEKMREVV 677
            EDE KD+K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGV RNKYQI IPLPPKIDP+VTMM VEEKP VTY+DVGGCKE  EK+REVV
Sbjct:   14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVV 191          
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.846e-68
Identity = 127/179 (70.95%), Postives = 148/179 (82.68%), Query Frame = 3
Query:  141 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVGRNKYQIQIPLPPKIDPSVTMMTVEEKPXVTYNDVGGCKEXXEKMREVV 677
            ++E K++K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGV RNKYQI IPLPPKIDP+VTMM VEEKP VTY+DVGGCKE  EK+REVV
Sbjct:   13 KEEEKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVV 191          
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 9.481e-65
Identity = 118/179 (65.92%), Postives = 145/179 (81.01%), Query Frame = 3
Query:  141 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVGRNKYQIQIPLPPKIDPSVTMMTVEEKPXVTYNDVGGCKEXXEKMREVV 677
            +D  ++EKN + LDE DIA+LK YG GPY+  +K  + +I++  KKVN+L G+KESDTGLA P+ WD+ +DKQ MQ+EQPLQVARCTKII+ +  D +Y+INVKQ AKFVV L D V+PTDIEEGMRVGV RNKYQI +PLP KIDP+VTMM VEEKP VTY+DVGGCK+  EK+REVV
Sbjct:   15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVV 193          
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 8.874e-63
Identity = 117/152 (76.97%), Postives = 134/152 (88.16%), Query Frame = 3
Query:  222 PYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVGRNKYQIQIPLPPKIDPSVTMMTVEEKPXVTYNDVGGCKEXXEKMREVV 677
            PYS  IKK EKEI ++A+K+ +L GIKESDTGLA P+QWDLVSDKQMMQEEQPL VA CT+IISPN+EDAKYV+++K+I K+VVGLGDK SPTDIE GMRVGV + KYQIQIPLPPKIDPSVTMMTVEEKP  TY+D+GGCKE  EK+REVV
Sbjct:   71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVV 221          
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 9.812e-62
Identity = 117/181 (64.64%), Postives = 142/181 (78.45%), Query Frame = 3
Query:  141 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIIS--PNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVGRNKYQIQIPLPPKIDPSVTMMTVEEKPXVTYNDVGGCKEXXEKMREVV 677
            + E +++KNP PLDE DI LLK+Y  GPY+  +   +++ + + K++ND  GIKESDTGLA  S WD+ +D+Q M EEQPLQVARCTKII    ++E   YVIN+KQIAKFVV LG++VSPTDIEEGMRVG  RNKY IQ+PLPPKIDPSVTMM VEEKP VTY DVGGCKE  E++REVV
Sbjct:   15 DTEEENDKNPPPLDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVV 195          
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.672e-59
Identity = 115/211 (54.50%), Postives = 144/211 (68.25%), Query Frame = 3
Query:  135 EPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPN------------------------------SEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVGRNKYQIQIPLPPKIDPSVTMMTVEEKPXVTYNDVGGCKEXXEKMREVV 677
            E +D+  D+    PL E DI +LK+YG  PY+  +K+ E ++KD+  ++ +  G+KESDTGLA    WD++ D+Q + EE PLQVARCTKII  N                               EDAKYVIN+KQIAKFVVGLG++VSPTDIEEGMRVGV R+KY I++PLPP+IDPSVTMMTVEEKP VTY+DVGGCK+  EK+REVV
Sbjct:   15 EDDDKKPDDDKIVPLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVV 225          
BLAST of DN134807 vs. ExPASy Swiss-Prot
Match: FB58_ARATH (F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 3
Query:  174 PLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 389
            PLDEDDIAL+KTYGL PYS  IKK EKEIK++ +K+NDLCGIKESDTGLA  S       KQMMQE QPLQV
Sbjct:    9 PLDEDDIALVKTYGLVPYSAPIKKVEKEIKELTEKINDLCGIKESDTGLAPLS-------KQMMQEGQPLQV 73          
The following BLAST results are available for this feature:
BLAST of DN134807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PRS7_BOVIN8.287e-6972.6326S protease regulatory subunit 7 OS=Bos taurus GN... [more]
PRS7_XENLA1.846e-6870.9526S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_CAEEL9.481e-6565.9226S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PRS7B_ARATH8.874e-6376.9726S protease regulatory subunit 7 homolog B OS=Ara... [more]
PRS7_SCHPO9.812e-6264.6426S protease regulatory subunit 7 homolog OS=Schiz... [more]
PRS7_YEAST2.672e-5954.5026S protease regulatory subunit 7 homolog OS=Sacch... [more]
FB58_ARATH1.097e-2072.22F-box protein At1g53790 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionwca01e09 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01e09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134807 ID=DN134807; Name=DN134807; organism=Citrus sinensis; type=EST; length=677bp
TTAATTTAATAAACATTATTACTCTATAAATATCAACCTACTAAGCCGAA
AAATTTTTGCACTTTTATTTCTCCGCAAGCAATCTTAAATCTTAGTCTTC
CAAGCTAGCAAAGGAAAGCAAAGCCATGGCACCGGAGCCGGAAGATGAGA
TCAAGGACGAGAAAAACCCTAGGCCTCTCGATGAAGACGATATCGCTCTT
CTCAAAACCTATGGTTTAGGACCTTATTCTACTAGCATTAAGAAAGCGGA
GAAAGAAATAAAGGATATGGCCAAGAAGGTCAATGACCTGTGTGGTATCA
AGGAGTCTGATACGGGATTAGCTGCACCTAGCCAGTGGGATCTTGTGTCG
GATAAGCAGATGATGCAAGAGGAACAGCCGCTTCAGGTAGCAAGATGCAC
CAAGATAATCAGTCCAAACTCTGAAGATGCCAAATATGTTATAAATGTTA
AGCAGATTGCAAAGTTTGTTGTTGGGCTTGGTGATAAAGTTTCCCCAACG
GATATAGAAGAGGGCATGCGTGTGGGGGTTGGCAGAAATAAATATCAGAT
TCAAATTCCCTTGCCTCCAAAAATTGATCCAAGTGTGACCATGATGACCG
TGGAAGAGAAGCCNNNTGTTACATATAATGATGTTGGCGGATGCAAGGAG
CNNNTTGAAAAGATGCGAGAAGTTGTT
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