CX044018

Overview
NameCX044018
Unique NameCX044018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_NEUCR (Translation machinery-associated protein 22 OS=Neurospora crassa GN=tma-22 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 65/176 (36.93%), Postives = 93/176 (52.84%), Query Frame = -2
Query:  341 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 865
            V+YC VCSLP EYCE+G  ++KC+ WL +N P +Y  + + E+   E   +  + Q   +        KAE  +                           +T+V GLE FG++L   +K  GKKFATG+SV K P+  E+I VQGD+S +I EFI + + +VPE  I  +ED KK
Sbjct:    9 VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAMKDAKKKAAKAEAAEQKQADKRANSVVTIKRIERNKRKY---VTSVSGLEAFGLELKKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVEDKKK 181          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_CHAGB (Translation machinery-associated protein 22 OS=Chaetomium globosum GN=TMA22 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.656e-24
Identity = 67/178 (37.64%), Postives = 94/178 (52.81%), Query Frame = -2
Query:  341 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL--AEELNSREAD-KVGEQLQSTGIXXXXXXXPKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 865
            ++YC VC+LP EYCE+G   +KC+ WL +  PDLY  +   E L +  A   +  Q ++           +A E KH                        K +T+V GLE FG++L   +K  GKKFATGASV K P+  E+I VQGD+S +I EF+ + + D+PE  I  +ED KK
Sbjct:   11 IIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIWSPEALEAATASLSLAAQERAAKDAAKKAAKAEAAEQKHAD-----KLAKSVVTIKRIERNKRKFVTSVTGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDIPEDNIELVEDKKK 183          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_SCHPO (Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe GN=tma22 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.646e-23
Identity = 66/183 (36.07%), Postives = 93/183 (50.82%), Query Frame = -2
Query:  344 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYP------DLAEELNSR---EADKVGEQLQSTGIXXXXXXXPKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGK 865
            VLYC VC+LP EYCEF   L+KCK WL  + PD+Y       DL+++L +       K     +            + EE K +                         +TTV+GL+ FG++   A+K L  KFATGASV K   +K++I VQGD++YDI +FI + + +VPE  I  +ED K
Sbjct:   12 VLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQDLSKDLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKR---------VTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIKIVEDTK 185          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_NEOFI (Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tma22 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.914e-22
Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = -2
Query:  341 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 877
            Q  +V+YC VC+LP EYCEFG   +KC+ WL  N  DLY  L +EE  S    ++   ++            KA   +                           +T + GLE+ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED KK
Sbjct:   13 QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLYQRLYSEEALSSNLSELSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKH---VTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNIELVEDKKK 190          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_ASPFU (Translation machinery-associated protein 22 OS=Aspergillus fumigatus GN=tma22 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.540e-21
Identity = 61/181 (33.70%), Postives = 92/181 (50.83%), Query Frame = -2
Query:  341 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 877
            Q  +V+YC VC+LP EYCEFG   +KC+ WL  N  +LY  L +EE  S    ++   ++            KA   +                           +T + GLE+ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED KK
Sbjct:   13 QAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELYQRLYSEEALSSNLSELSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKH---VTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNIELVEDKKK 190          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_ASPOR (Translation machinery-associated protein 22 OS=Aspergillus oryzae GN=tma22 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.304e-20
Identity = 61/182 (33.52%), Postives = 90/182 (49.45%), Query Frame = -2
Query:  341 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHL--PGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 877
            Q   V+YC VC+LP EYCEFG   +KC+ WL +  P+LY    + L+S EA        S             +E K                           K +T + GLE++G++    +K+LGKKFATG+SV +     E+I VQGD+S D+ +++ + +  ++PE  I  IED KK
Sbjct:   13 QARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKEKQPELY----QRLHSEEAISANLSTLSISAQERAAKDAAKKEAKAALAEARDAERKAASKVQIKRVERNKRKHVTVIAGLEVYGLENKKVAKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVYGKEIPEANIEIIEDKKK 190          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_CHICK (Density-regulated protein OS=Gallus gallus GN=DENR PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.224e-20
Identity = 62/183 (33.88%), Postives = 93/183 (50.82%), Query Frame = -2
Query:  341 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHLPGG-----XXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 874
            P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N PD +  L  E + ++   VGE   + G         + E+ K   GG                         K +T V GL  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP+V + +I  + + KK
Sbjct:   28 PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGEGQGTAG--------EEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_ASPCL (Translation machinery-associated protein 22 OS=Aspergillus clavatus GN=tma22 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.955e-20
Identity = 60/179 (33.52%), Postives = 89/179 (49.72%), Query Frame = -2
Query:  341 RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHL--PGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 868
            +++YC VC+LP EYCEFG   +KC+ WL  N  + Y    + L S EA        S  +          +E K                           K +T + GLE+ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED KK
Sbjct:   16 QIVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHEETY----QRLYSEEALSSNLSTLSVSVRERAAKDAAKKEAKAALAEARDAERKAAAKVQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLEVYGKELPESNIELVEDKKK 190          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_MOUSE (Density-regulated protein OS=Mus musculus GN=Denr PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.195e-19
Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = -2
Query:  341 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXPKAEEVKHLPGG------XXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 874
            P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ +  L  E + +         Q TGI        + EE K    G                          K +T V GL  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP+V + +I  + + KK
Sbjct:   28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPK---------QETGITEGQGPVGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198          
BLAST of CX044018 vs. ExPASy Swiss-Prot
Match: DENR_CRYNE (Translation machinery-associated protein 22 OS=Cryptococcus neoformans GN=TMA22 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.594e-18
Identity = 69/190 (36.32%), Postives = 87/190 (45.79%), Query Frame = -2
Query:  332 VRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYP------DLAEELNSREADKVGEQLQSTGIXXXXXXXPKAE-EVKHLPGGXXXXXXXXXXXXXXXXXXXXKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI---TDTWPDVPETAIFFIEDGKKVPA 871
            V   YCAVCSLP EYCEFGP + KCK WL +   D Y        LA  + +   DK  E+L++           KAE E K                            T ++ LELFGV L  A+K+   KFATG+SV K P  +E+I +QGD+  +IVE I         VP   I  +E  KK  A
Sbjct:   13 VHPFYCAVCSLPTEYCEFGPSVSKCKAWLEEQDKDEYERVWGEGALASRIGTLSLDK-QEKLEADAAKLEKKAAKKAEAEAKKKEQTKIIIKRSERTKRKHQ--------THIQNLELFGVDLKKAAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMIRQQVGALKGVPADQITRVEVKKKKEA 193          
The following BLAST results are available for this feature:
BLAST of CX044018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DENR_NEUCR6.681e-2536.93Translation machinery-associated protein 22 OS=Neu... [more]
DENR_CHAGB5.656e-2437.64Translation machinery-associated protein 22 OS=Cha... [more]
DENR_SCHPO1.646e-2336.07Translation machinery-associated protein 22 OS=Sch... [more]
DENR_NEOFI6.914e-2234.25Translation machinery-associated protein 22 OS=Neo... [more]
DENR_ASPFU1.540e-2133.70Translation machinery-associated protein 22 OS=Asp... [more]
DENR_ASPOR1.304e-2033.52Translation machinery-associated protein 22 OS=Asp... [more]
DENR_CHICK2.224e-2033.88Density-regulated protein OS=Gallus gallus GN=DENR... [more]
DENR_ASPCL4.955e-2033.52Translation machinery-associated protein 22 OS=Asp... [more]
DENR_MOUSE4.195e-1933.15Density-regulated protein OS=Mus musculus GN=Denr ... [more]
DENR_CRYNE1.594e-1836.32Translation machinery-associated protein 22 OS=Cry... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14H04_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14H04-P8-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044018 ID=CX044018; Name=CX044018; organism=Citrus sinensis; type=EST; length=878bp
CCTGAGAGAATCTTTTTATTACTTCTAAAAAATCAACTGAACAGAAACTG
AAATTACATGTAATGCTTCAATGAGAAAAGAAAAGAAAACACCACCAATA
TAGTCACTATATAATCATACCATTAACTTTAATACATATTTCAAACAAAA
ATTAACTATTTTGGTAACAAAGCAACACAGGACCAAATAAGAGGCGAAAA
GTCTCACAAGCCATGAAACCTGTCAAGCAGCCTTTACTTTGTGACTACGT
ATAAAAATCTCGTGAGAGACTTGTGAAGAGGAAGGAAGATACCATATTCC
ATTTTTCCATGAGCTACTATTTCAATCAAACAGCAGGCACTTTCTTTCCA
TCTTCGATGAAGAAGATTGCAGTTTCAGGAACATCAGGCCAGGTATCTGT
TATAAACTCCACGATGTCGTATGATATGTCTCCTTGGACATCAATTTGCT
CCTTCTCAGTTGGTCCCTTAACAACAGAGGCTCCTGTAGCAAACTTTTTC
CCAAGTTTCTTTGAAGCATCACTAAGTTTAACACCAAAAAGTTCCAGGCC
TTTAACTGTAGTGATACATTTCCGTTTGTTACGAACAACCTTTTCGATAA
CAACTTCTTTCTTATCCTTTTTCTTTATCTTTCCACCAGGAAGGTGTTTA
ACTTCTTCTGCCTTAGGAGCTGAAGAAGCAGGAGAGGAAATGCCAGTTGA
TTGTAACTGCTCGCCGACTTTATCGGCTTCCCTCGAATTTAACTCTTCGG
CAAGATCGGGGTAAAGGTCCGGTGTGTTTTGAATTAGCCAGGGCTTGCAT
TTCTCGAGATCGGGTCCGAATTCACAGTACTCCGCCGGTAAACTGCACAC
CGCACAGTACAGTACGCGAACCGGCTGC
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