DN134804

Overview
NameDN134804
Unique NameDN134804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7629 contig Csv1_Contig7629:30..598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN134804 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.058e-29
Identity = 69/157 (43.95%), Postives = 101/157 (64.33%), Query Frame = 1 
Query:   49 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVAXXFFAA 513
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +     A+
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIAS 166
The following BLAST results are available for this feature:
BLAST of DN134804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN2.058e-2943.95Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionwca01e04 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01e04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134804 ID=DN134804; Name=DN134804; organism=Citrus sinensis; type=EST; length=569bp
AAAGGAAAGAATCCCCGAAATTGAACTGAATAATTCTCGGTAATGGCGTC
GAAAAGCAAGATTCTATTCATCGGCGGTACAGGGTACATCGGCAAATTCA
TCGTCGAAGCGAGCGCGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGA
GAATCCACACTCTCCGATCCTTCCAAATCTCAGCTCCTCGATCACTTCAA
AAAACTCGGCGTCAATCTCGTCATCGGAGATGTGTTGAATCACGAGAGCT
TGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGGTCAC
ACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCTGG
TAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATCGAG
TCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAAAATC
CGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGTNNNA
TTTCTTTGCTGCTTNNTTCCTTCCCAATTTGTCGCNNNCCGGGGCCACTG
CCCCACCTAGGGANNNAGT
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