DN134800

Overview
NameDN134800
Unique NameDN134800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_LEIME (Triosephosphate isomerase OS=Leishmania mexicana PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.298e-57
Identity = 115/223 (51.57%), Postives = 151/223 (67.71%), Query Frame = 1
Query:   88 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            NWKCNGT   ++K+V V NE                F+ + LV++ LR P + ++A+N  + K GAFTGE+S  +L ++G+ WVILGHSERR    E++E V  KV+ A  QG  VIAC+GETL+QREA  T  VV +QT AIA +++  +W+ +VLAYEPVWAIGTGKVATP QAQEVH  LRKW+  N   ++AA  RI+YGGSVN AN   L A+PD++G
Sbjct:   12 NWKCNGTTASIEKLVQVFNE--HTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAENA-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDING 231          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.120e-57
Identity = 114/229 (49.78%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R+FFVGGN+K NGT E V KIV  LN+ +              ++ L  V  + +    V+AQNC+ K  GA+TGEIS E + +LG  W + GHSERR I+ ES++F+  K  +AL QGL VI C+GETLE+R+A  T+DV A Q  A+A  VS WS IV+AYEPVWAIGTG  ATP  AQE H  +R+ L  +   + A  TRI+YGGSVNG N  E   + DVDG
Sbjct:    1 MARQFFVGGNFKMNGTRESVSKIVDGLNKAELPSNVEVVIAPPAPYIALA-VNENKQKTIEVSAQNCFDKASGAYTGEISPEQIKDLGATWTLTGHSERRTIIKESDDFIASKTKFALDQGLSVILCIGETLEERKANVTLDVCARQLDAVARVVSDWSKIVVAYEPVWAIGTGLAATPEDAQETHKAIREHLSKSIGADAAEKTRILYGGSVNGKNAPEFKDKADVDG 228          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_TAESO (Triosephosphate isomerase OS=Taenia solium PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.541e-56
Identity = 116/232 (50.00%), Postives = 139/232 (59.91%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M RK FVGGNWK NG+   +      L +                +L     K+       +AA+NC+    GAFTGEIS EM+ + G  WVILGHSERR I  ESNE +G+KV +AL  GL VI C+GE L +REAG T DV  AQ  AIA  V S   W  +V+AYEPVWAIGTGK ATPAQAQEVH  +R W+  +    IA   RI+YGGSV  +N K+L  QPDVDG
Sbjct:    1 MTRKLFVGGNWKMNGSYSHINTFFDTLQKADTDPNADIVIGVPACYLKYAQDKAP--KGIKIAAENCYKVGSGAFTGEISTEMIKDCGCEWVILGHSERRHIFGESNELIGEKVKHALDSGLNVIPCIGELLSEREAGKTNDVCFAQMDAIAKNVPSKEAWDKVVIAYEPVWAIGTGKTATPAQAQEVHKVVRDWIRKHVDAGIADKVRILYGGSVTASNAKDLGTQPDVDG 230          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_EMENI (Triosephosphate isomerase OS=Emericella nidulans GN=tpiA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.661e-56
Identity = 118/231 (51.08%), Postives = 143/231 (61.90%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M RKFFVGGN+K NG  E    I+  LN                  L+L   +     +  VAAQN + K  GAFTGEIS + L    I W ILGHSERR+IL E++EF+  K   A+  GL+VI C+GETLE+REA  T+DVV  Q  A A  +S   W+ +V+AYEPVWAIGTGKVAT  QAQEVH  +RKWL    S E A  TRIIYGGSV+  NCK+LA + D+DG
Sbjct:    1 MPRKFFVGGNFKMNGNAESTTSIIKNLNSANLDKSVEVVVSPPA--LYLLQAREVANKEIGVAAQNVFDKPNGAFTGEISVQQLREANIDWTILGHSERRVILKETDEFIARKTKAAIEGGLQVIFCIGETLEEREANKTIDVVTRQLNAAAKELSKEQWAKVVIAYEPVWAIGTGKVATTEQAQEVHSAIRKWLKDAISAEAAENTRIIYGGSVSEKNCKDLAKEADIDG 229          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_ZYGBA (Triosephosphate isomerase OS=Zygosaccharomyces bailii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.394e-56
Identity = 110/231 (47.62%), Postives = 146/231 (63.20%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFL--FLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R FFVGGN+K NGT   +K+IV  LN  +              +L   + LVK S      V AQN ++K  GAFTGE S + + ++G  WVILGHSERR    E ++ + +K A+ALSQG+ VI C+GETL+Q++AG+T+ VV  Q +A+ D+V  WSN+V+AYEPVWAIGTG  ATP  AQE+H  +R++L      + A  TRI+YGGS NG N      +PDVDG
Sbjct:    1 MARTFFVGGNFKLNGTKSSIKEIVERLNNAKLDPKVEVVLCPPAPYLDYTVSLVKKS---QVSVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRQYFREDDQLIAEKTAFALSQGVGVILCIGETLDQKKAGTTLQVVERQLQAVIDKVKDWSNVVIAYEPVWAIGTGLAATPEDAQEIHHSIREFLAKKLGEKTAQETRILYGGSANGKNAVTFKDKPDVDG 228          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.810e-55
Identity = 116/232 (50.00%), Postives = 149/232 (64.22%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTP-EEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R FFVGGNWK N T     K +V  LN+                 L+L  ++        VAAQN + K+ GAFTGEIS + + + GIP+VILGHSERR + +E++E V  K   AL  GLKVI C+GETL++RE G T  V   Q  A+  ++    WSNIV+AYEPVWAIGTGKVAT +QAQE H ++RK+L    SP++A+ TR+IYGGSVN AN K+LA+Q D+DG
Sbjct:    1 MTRSFFVGGNWKLNPTSLSAAKALVEALNKADLDPSTEVVVAPPA--LYLLPIQEIAGKAVKVAAQNAYFKESGAFTGEISPKQISDAGIPYVILGHSERRTLFHETSEVVALKTRAALDNGLKVILCIGETLKEREEGRTAAVCEEQLSAVVKQLKEEDWSNIVIAYEPVWAIGTGKVATTSQAQETHVDVRKYLATAVSPKVASETRVIYGGSVNAANSKDLASQQDIDG 230          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 1.821e-54
Identity = 109/230 (47.39%), Postives = 147/230 (63.91%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGL-VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R+FFVGGN+K NGT +++  I+  LN+                 L+LGL V+ + +P   + AQN + K  GAFTGE  A  ++++G  W + GHSERR I+ ES+EF+ +K  +AL  G+KVI C+GETLE+R+ G T+DV A Q  A++  VS WSNIV+AYEPVWAIGTG  ATP  A+E H  +R  L  +   E A  TRI+YGGSVNG N K+   + +VDG
Sbjct:    1 MARQFFVGGNFKANGTKQQITSIIDNLNKADLPKDVEVVICPPA--LYLGLAVEQNKQPTVAIGAQNVFDKSCGAFTGETCASQILDVGASWTLTGHSERRTIIKESDEFIAEKTKFALDTGVKVILCIGETLEERKGGVTLDVCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDG 228          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.379e-54
Identity = 106/231 (45.89%), Postives = 146/231 (63.20%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFL--FLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R FFVGGN+K NG+ + +K+IV  LN                 +L   + LVK   +P   V AQN ++K  GAFTGE S + + ++G  WVILGHSERR   +E ++F+ DK  +AL QG+ VI C+GETLE+++AG T+DVV  Q  A+ + V  W+N+V+AYEPVWAIGTG  ATP  AQ++H  +RK+L +    + A+  RI+YGGS NG+N      + DVDG
Sbjct:    1 MARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDG 228          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_KLUMA (Triosephosphate isomerase OS=Kluyveromyces marxianus GN=TPI1 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.859e-53
Identity = 104/229 (45.41%), Postives = 141/229 (61.57%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R FF+GGN+K NGT   +K+IV  LN                 +L    V  + +    VAAQN ++K  GAFTGE S E + ++G  WVILGHSERR   +E++EF+ DK  +AL  G+KVI C+GETLE+++ G T++VV  Q +A+ D+V  W+N+V+AYEPVWAIGTG  AT   AQ +H  +R++L    S + A   RI+YGGS NG N      + DVDG
Sbjct:    1 MARTFFIGGNFKMNGTKASIKEIVERLNSASIPSNVEVVIAPPAAYLDHA-VSLNKKAQVSVAAQNAYLKASGAFTGENSVEQIKDVGAEWVILGHSERRTYFHETDEFIADKTKFALDSGVKVILCIGETLEEKQKGITLEVVQRQLQAVLDKVQDWTNVVVAYEPVWAIGTGLAATSDDAQAIHHSIREFLAKKLSKDTAEKIRILYGGSANGKNAVTFKDKADVDG 228          
BLAST of DN134800 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.993e-53
Identity = 111/230 (48.26%), Postives = 143/230 (62.17%), Query Frame = 1
Query:   61 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDG 747
            M R FFVGGN+K NG+ E +K IV  LN  +              F +L L K SL+ P   VA QN + K  GAFTGE+S   L ++G  WVILGHSERR I  ES+E++ DK  YAL  GL VI C+GET+++++AG T+DVV +Q   +  ++  WSN+V+AYEPVWAIGTG  AT   AQ++H E+R +L      + A   RIIYGGSVNG N      + DVDG
Sbjct:    1 MSRTFFVGGNFKMNGSLESIKAIVERLNASELDPKTEVVISPP--FPYLLLAKESLKKPTVSVAGQNSFDKGDGAFTGEVSVAQLKDVGAKWVILGHSERRTINKESSEWIADKTKYALDNGLDVILCIGETIDEKKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDG 227          
The following BLAST results are available for this feature:
BLAST of DN134800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_LEIME2.298e-5751.57Triosephosphate isomerase OS=Leishmania mexicana P... [more]
TPIS_DEBHA5.120e-5749.78Triosephosphate isomerase OS=Debaryomyces hansenii... [more]
TPIS_TAESO2.541e-5650.00Triosephosphate isomerase OS=Taenia solium PE=2 SV... [more]
TPIS_EMENI5.661e-5651.08Triosephosphate isomerase OS=Emericella nidulans G... [more]
TPIS_ZYGBA7.394e-5647.62Triosephosphate isomerase OS=Zygosaccharomyces bai... [more]
TPIS_COPC72.810e-5550.00Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPIS_CANAL1.821e-5447.39Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_YEAST2.379e-5445.89Triosephosphate isomerase OS=Saccharomyces cerevis... [more]
TPIS_KLUMA5.859e-5345.41Triosephosphate isomerase OS=Kluyveromyces marxian... [more]
TPIS_YARLI9.993e-5348.26Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]

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Properties
Property NameValue
Genbank descriptionwca01d11 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01d11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134800 ID=DN134800; Name=DN134800; organism=Citrus sinensis; type=EST; length=749bp
CGGCCGGGGNNNATAGAAAATAAAACATAACACACACACCGACACACGCA
CTCGTCGAACATGGGCAGGAAGTTCTTCGTCGGCGGTAACTGGAAATGCA
ATGGAACACCTGAAGAAGTGAAAAAGATAGTGAGCGTACTCAATGAAGGT
CAAGTTCCATCTTCTGATGTCGTTGAGGTCGTTGTTAGCCCTCCGTTTCT
GTTTCTTGGACTGGTGAAGAGTTCGTTGAGGCCTGATTTTCATGTTGCGG
CACAGAATTGCTGGGTCAAGAAGGGAGGTGCTTTCACCGGTGAGATTAGT
GCGGAAATGCTCGTCAATTTGGGTATTCCTTGGGTCATTCTTGGTCATTC
TGAAAGGAGACTCATTTTGAATGAATCAAATGAGTTTGTTGGGGATAAGG
TTGCATATGCACTTTCTCAAGGTTTGAAGGTGATTGCTTGTGTTGGTGAG
ACACTTGAGCAGCGTGAAGCAGGATCTACTATGGATGTTGTTGCTGCACA
AACTAAAGCAATCGCAGATCGAGTCTCAAGCTGGTCAAACATTGTTTTGG
CCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCAGCG
CAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAACAC
CAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCGTAA
ATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGATT
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