DN134796

Overview
NameDN134796
Unique NameDN134796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN134796 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.865e-36
Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 1 
Query:   52 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVY 609
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYF 197
The following BLAST results are available for this feature:
BLAST of DN134796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN5.865e-3643.09Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionwca01d07 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01d07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134796 ID=DN134796; Name=DN134796; organism=Citrus sinensis; type=EST; length=611bp
AAAAAAGGAAAGAATCCCCGAAATTGAACTGAATAATTCTCGGTAATGGC
GTCGAAAAGCAAGATTCTATTCATCGGCGGTACAGGGTACATCGGCAAAT
TCATCGTCGAAGCGAGCGCGAAAGCCGGCCACCCGACGTTCGTGCTCGTG
AGAGAATCCACACTCTCCGATCCTTCCAAATCTCAGCTCCTCGATCACTT
CAAAAAACTCGGCGTCAATCTCGTCATCGGAGATGTGTTGAATCACGAGA
GCTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGGT
CACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGC
TGGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATC
GAGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAAA
ATCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGTC
GAATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCA
CTGCCCCACCTAGGGATAAAGTTGTCATCTTAGGCGATGGAAATCCAAAA
GCTGTTTATAA
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