DN134795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_METLZ (30S ribosomal protein S12P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps12p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.218e-29 Identity = 67/127 (52.76%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 471 +G A R L ++ RW+D Y + L + K P G+ + IVLEK+G+EAKQPNSAIRKC RVQLIKNG+++ AF DG +N+I+E+DEV I G GR G ++GDIPGVRF V V+GVSL Sbjct: 3 QGKFAARNLVRTAKKFRWSDSVYSRRALKLKLKADPLEGAPIGRAIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFAVGDGAINFIDEHDEVTICGIGGRAGRSMGDIPGVRFVVSGVNGVSL 129
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_METM7 (30S ribosomal protein S12P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps12p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.489e-29 Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 +G AGRKL RR RW Y L + K P G+ +GIV+EK+G+EAKQPNSAIRKC RVQLIKNG+++ AF P + +N+I+E+DEV+I G G G A GDIPGVR+KVV V S+ L + Sbjct: 8 KGEFAGRKLLLKRRASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVVEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVMVGKNSIRELVR 139
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_METMP (30S ribosomal protein S12P OS=Methanococcus maripaludis GN=rps12p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.223e-28 Identity = 67/132 (50.76%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 +G AGRKL R+ RW Y L + K P G+ +GIV+EK+G+EAKQPNSAIRKC RVQLIKNG+++ AF P + +N+I+E+DEV+I G G G A GDIPGVR+KVV V S+ L + Sbjct: 8 KGEFAGRKLLLKRKASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVIEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVLVGKNSIRELVR 139
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_METM5 (30S ribosomal protein S12P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps12p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.223e-28 Identity = 67/132 (50.76%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 +G AGRKL R+ RW Y L + K P G+ +GIV+EK+G+EAKQPNSAIRKC RVQLIKNG+++ AF P + +N+I+E+DEV+I G G G A GDIPGVR+KVV V S+ L + Sbjct: 8 KGEFAGRKLLLKRKASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVVEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVMVGKNSIRELVR 139
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_METJA (30S ribosomal protein S12P OS=Methanocaldococcus jannaschii GN=rps12p PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.223e-28 Identity = 68/133 (51.13%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFG--RKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 RG AGRKL+ R+ RW D +Y + L + K P G+ A+GIV+EK+G+EAKQPNSAIRKC RVQLIKNG+ + AF P + +N+I+E+DEV+I G G + A GDIPGV++KV+ V SL L + Sbjct: 8 RGEFAGRKLRLKRKWCRWHDYNYVRRVLKLKEKYDPLEGAPMARGIVIEKVGLEAKQPNSAIRKCVRVQLIKNGRVVTAFCPGNHAINFIDEHDEVIIEGIGGPKGPRAKGDIPGVKYKVIMVGRNSLRELVR 140
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_METVS (30S ribosomal protein S12P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps12p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.086e-28 Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 +G AGRKL R+ RW Y LG + K P G+ +GIV+EK+G+EAKQPNSAIRKC +VQLIKNG+ + AF P + +N+I+E+DEV+I G G G A GDIPGVR+KV+ V S+ L + Sbjct: 8 KGEFAGRKLLLKRKATRWQHYKYVNRELGLKVKADPLGGAPMGRGIVVEKVGLEAKQPNSAIRKCVKVQLIKNGRVVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVLMVGKNSIRELVR 139
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_META3 (30S ribosomal protein S12P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps12p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.927e-28 Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 97 RGMGAGRKLKSHRRRQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 +G AGRK+ R+ RW Y L E P G+ +GIV+EK+G+EAKQPNSAIRKC +VQLIKNG+ + AF P + +N+I+E+DEV+I G G G A GDIPGVRF+VV V S+ L + Sbjct: 8 KGEFAGRKIVLKRKESRWHHYKYVNKALKLKEKSDPLGGAPMGRGIVVEKVGLEAKQPNSAIRKCVKVQLIKNGRVVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRFRVVMVGKNSMRELVR 139
BLAST of DN134795 vs. ExPASy Swiss-Prot
Match: RS12_NANEQ (30S ribosomal protein S12P OS=Nanoarchaeum equitans GN=rps12p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.550e-26 Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 100 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFK 486 G+ AGRKLK R++ RW D Y + L + K P G+ A GIVLEK +E +QPNS K RVQL KNGK + AF P DG + I+E+DEVLI G GR+G ++GDIPGVR+KV V+G L L K Sbjct: 5 GLFAGRKLKKIRKKFRWNDYRYVRRMLRIKEKYDPLEGAPMASGIVLEKTDVERRQPNSGRIKVVRVQLKKNGKVVTAFTPGDGAIKVIDEHDEVLIVGIRGRQGRSMGDIPGVRYKVYLVNGQPLELLRK 135 The following BLAST results are available for this feature:
BLAST of DN134795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DN134795 ID=DN134795; Name=DN134795; organism=Citrus sinensis; type=EST; length=491bpback to top |