DN134772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_PONAB (60S ribosomal protein L13a OS=Pongo abelii GN=RPL13A PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33 Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKTKRG AAL R Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDR 101
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_PIG (60S ribosomal protein L13a (Fragment) OS=Sus scrofa GN=RPL13A PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33 Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKTKRG AAL R Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDR 97
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_MACFA (60S ribosomal protein L13a OS=Macaca fascicularis GN=RPL13A PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33 Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKTKRG AAL R Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDR 101
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_HUMAN (60S ribosomal protein L13a OS=Homo sapiens GN=RPL13A PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33 Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKTKRG AAL R Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDR 101
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_SPOFR (60S ribosomal protein L13a OS=Spodoptera frugiperda GN=RpL13A PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.498e-32 Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 2 Query: 191 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +G K +V+D R H+LGRLA+++AK LL G KVV VRCE+I +SG R K+K+M FLRKR N P+ GP HFRAP+KI W+TVRGMIPHKT+RG +AL R Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRR 103
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_CHOPR (60S ribosomal protein L13a OS=Choristoneura parallela GN=RpL13A PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.089e-31 Identity = 61/102 (59.80%), Postives = 77/102 (75.49%), Query Frame = 2 Query: 191 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +G K +V+D R H+LGRLA+++AK LL G KVV VRCE++ +SG R K+K+M FLRKR N P+ GP HFRAP+KI W+TVRGMIPHKT+RG AL R Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRR 103
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_DROME (60S ribosomal protein L13a OS=Drosophila melanogaster GN=RpL13A PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.654e-31 Identity = 62/102 (60.78%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 191 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +G+ + VV+D R H+LGRLAS+VAK LL G KV VRCEE+ +SG R K+K++ +LRKR N P+ GP HFRAP++IF++ VRGMIPHKTKRG AALAR Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALAR 103
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_CAEEL (60S ribosomal protein L13a OS=Caenorhabditis elegans GN=rpl-16 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.310e-30 Identity = 60/99 (60.61%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 194 GICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAAL 490 G+ + +++D ++H+LGRLASIVAK+LL G KVV +R EEI +SG R K+KYM FLRKR N P+ G H+RAP KIFWRTVRGM+PHKT RG AL Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEAL 100
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_SALTR (60S ribosomal protein L13a (Fragment) OS=Salmo trutta GN=rpl13a PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.940e-30 Identity = 62/87 (71.26%), Postives = 71/87 (81.61%), Query Frame = 2 Query: 236 MLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +LGRLA+IVA E+L G KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKTKRG AAL R Sbjct: 1 LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALER 87
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL16B_SCHPO (60S ribosomal protein L16-B OS=Schizosaccharomyces pombe GN=rpl16b PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.688e-28 Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 2 Query: 206 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAAL 490 K VV+DA+ H+LGRLAS+VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK PS G HFRAP++IF + VRGM+PHKT RG AAL Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAAL 100 The following BLAST results are available for this feature:
BLAST of DN134772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN134772 ID=DN134772; Name=DN134772; organism=Citrus sinensis; type=EST; length=497bpback to top |