DN134772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL16A_SCHPO (60S ribosomal protein L16-A OS=Schizosaccharomyces pombe GN=rpl16a PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.688e-28 Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 2 Query: 206 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAAL 490 K VV+DA+ H+LGRLAS+VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK PS G HFRAP++IF + VRGM+PHKT RG AAL Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAAL 100
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL16_NEUCR (60S ribosomal protein L16 OS=Neurospora crassa GN=rpl-16 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 8.215e-28 Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSH-GPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 VV+D + H+LGRLASIVAK+LLNGQK+V VRCE + +SG R K+KY +LRK P+ GP HFRAP++IF++ VRGMIPHKT RGAAAL R Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALER 103
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13A_DICDI (60S ribosomal protein L13a OS=Dictyostelium discoideum GN=rpl13a PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.325e-27 Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 2 Query: 206 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAAL 490 K +V+D + H+LGRLAS+VAK LL+GQK+V VRCEE+ +SG L R K+K+ FL MNT + G H R+P+KIFWR VRGM+PHKT RG AAL Sbjct: 5 KAIVIDGKGHLLGRLASVVAKSLLSGQKIVVVRCEELNISGPLSRNKLKWADFLNLTMNTNHARGHRHGRSPSKIFWRAVRGMLPHKTPRGQAAL 99
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL16C_SCHPO (60S ribosomal protein L16-C OS=Schizosaccharomyces pombe GN=rpl16c PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.549e-26 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 2 Query: 206 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAAL 490 K V++DA+ H++GRLAS VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK PS G HFRAP++IF + VRGM+PHKT RG AL Sbjct: 6 KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIAL 100
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL16A_YEAST (60S ribosomal protein L16-A OS=Saccharomyces cerevisiae GN=RPL16A PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 1.312e-25 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 VV+D + H++GRLAS+VAK+LLNGQK+V VR EE+ +SG R K+KY FLRK + GP HFRAP++IF++ +RGM+ HKT RG AAL R Sbjct: 7 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRIFYKALRGMVSHKTARGKAALER 101
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL16B_YEAST (60S ribosomal protein L16-B OS=Saccharomyces cerevisiae GN=RPL16B PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.894e-24 Identity = 52/95 (54.74%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 VV+DA+ H+LGRLAS +AK++LNGQK+V VR E + +SG R K+KY FLRK + GP HFRAP++I ++ +RGM+ HKT RG AAL R Sbjct: 6 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRILYKAIRGMVSHKTARGKAALER 100
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13_ARCFU (50S ribosomal protein L13P OS=Archaeoglobus fulgidus GN=rpl13p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 215 VVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 V+DA H+LGRL+S +AK LLNG+++V V E+ ++G + M + R+ K GP R P +IF RTVRGM+P K+ RG A R Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKEKGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRR 108
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13_METKA (50S ribosomal protein L13P OS=Methanopyrus kandleri GN=rpl13p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.172e-12 Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 215 VVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 V+DA + +LGRLAS+VAK +L G+++ + E+ ++G ++ +L+K P GP + R P IF R VRGM+P KTKRG A R Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITG---KKNTIKEEWLQKIQRGDPKKGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKR 107
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RLSX_METTH (Fused L13/S9 ribosomal protein OS=Methanobacterium thermoautotrophicum GN=rpl13p/rps9p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.136e-11 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 212 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSH-GPIHFRAPAKIFWRTVRGMIPHKTKRGAAA 487 ++++ H+LGRLAS+V+K+LL G++V+ + E+I ++G KY + + + + P GP + R P IF RTVRGM+P+K +G A Sbjct: 4 MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNPRRMGPKYPRRPDDIFRRTVRGMLPYKKSKGREA 96
BLAST of DN134772 vs. ExPASy Swiss-Prot
Match: RL13_PYRKO (50S ribosomal protein L13P OS=Pyrococcus kodakaraensis GN=rpl13p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.096e-11 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 215 VVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALAR 496 +++A +LGRLAS VAK LL G++VV V E+ ++G KY + R T P GP + + +I RTVRGM+P KT RG A R Sbjct: 3 IINAEGLILGRLASKVAKMLLEGEEVVIVNAEKAIITGNREDIFAKYKQRTELRTRTNPRRGPFYPKRSDEIVRRTVRGMLPWKTDRGRKAFKR 96 The following BLAST results are available for this feature:
BLAST of DN134772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DN134772 ID=DN134772; Name=DN134772; organism=Citrus sinensis; type=EST; length=497bpback to top |