DN134763

Overview
NameDN134763
Unique NameDN134763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8093 contig Csv1_Contig8093:961..1628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: INDY1_DROME (Protein I'm not dead yet OS=Drosophila melanogaster GN=Indy PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19
Identity = 55/209 (26.32%), Postives = 105/209 (50.24%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPS-------MKQKG--------EKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            M+  E  V+ +F  ++ ++ TR       GW  L N +   +   ++ +  + F++P+         ++G          L+ W   + K+PW ++ LLG GFA+A+G + SG+A  +  AL  L+  P   +  +V L++  +T F SN A   +++P+L +++  + +HPL L++P  +    +F LP  TP N +     +I  +D
Sbjct:  332 MSIHEIQVMILFIFMVVMYFTRK-PGIFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGLKVLPNSVLLLVVILVAVFLTAFSSNVAIANIIIPVLAEMSLAIEIHPLYLILPAGLACSMAFHLPVSTPPNALVAGYANIRTKD 539          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: Y672_METJA (Uncharacterized transporter MJ0672 OS=Methanocaldococcus jannaschii GN=MJ0672 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11
Identity = 48/180 (26.67%), Postives = 85/180 (47.22%), Query Frame = 2
Query:   47 VLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMKQKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLS-KALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTG 583
            +L +F ++ +LW+      +I      FN +  D   ++    LLF+          L++ N  KK+ W  ++L G    +   +  SG    LS K +  L     + +  +V  I+ I+T FISN   T +++P+L  ++  +    L+L V   + A  SF+LP GTP N + ++ G
Sbjct:  240 LLVIFVLIASLWIISDYLSEI------FNVQYFDSVIAIFAIILLFVF--------NLVEVNDFKKIDWGTLILFGGALCLGGVIVKSGANTFLSEKLIAILGNLTPIVLLFLVVTITIILTNFISNTGLTGIIVPILFGVSLGIPKEILILAV--GMSASCSFILPVGTPPNAIVYSEG 403          
The following BLAST results are available for this feature:
BLAST of DN134763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
INDY1_DROME5.861e-1926.32Protein I'm not dead yet OS=Drosophila melanogaste... [more]
Y672_METJA1.546e-1126.67Uncharacterized transporter MJ0672 OS=Methanocaldo... [more]

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Properties
Property NameValue
Genbank descriptionwca01a02 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134763 ID=DN134763; Name=DN134763; organism=Citrus sinensis; type=EST; length=667bp
AGAGAGAGCTTGACATGTTAGGTCCATGGCTTTTGCTGAAANNNTGGTAC
TAGCTGTATTTGGGATGCTAATAGCATTGTGGATGACAAGATCAATAACA
GATGACATTCCAGGTTGGGGAGCACTCTTCAATGACCGTGCTGGTGATGG
AACTGCTAGTGTTGTGATGGCAACATTGTTGTTCATAATTCCAAGCATGA
AGCAAAAGGGAGAAAAATTGATGGATTGGAACAAATGCAAAAAGCTACCT
TGGAACATTATATTGCTTTTAGGGGCTGGCTTTGCTATAGCTGATGGAGT
CAGGACTAGCGGTCTTGCTGATGATCTGTCAAAAGCATTGGATTTCCTGG
AGGCGGCGCCATATTTAGCCATTGCACCTATCGTATGTCTGATTAGCGCG
ATTATTACTGAATTCATATCAAATAATGCCACAACAACTCTCGTTCTTCC
ACTTCTGATCCAAATAGCAAAAACTATGCATGTTCATCCATTGCTTCTTA
TGGTTCCTGGAGCAATTGGAGCACAATTTTCTTTCTTGTTGCCGACTGGA
ACCCCTTCAAATATCGTTGGATTCACAACCGGGCACATCGAAATTCAAGA
TANNNNNNNGANNGGGCTGCCCCTTCCNNNNGNTGGCATTGCTGCTCTGG
CCTTTCTAATGCCTACA
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