DC900350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_FRIAG (60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.650e-59 Identity = 121/154 (78.57%), Postives = 123/154 (79.87%), Query Frame = 3 Query: 102 MAPPKGETKKADPKVQALKTAKAVKSGRTF--KKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 MAPP KK D K QALK AKAVKSG + KKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVF MYDIQ KKVNTLIRPDGTKKAYVRLTPD DALD+ANKIGII Sbjct: 1 MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_DAUCA (60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.934e-58 Identity = 120/154 (77.92%), Postives = 124/154 (80.52%), Query Frame = 3 Query: 102 MAPPKGE-TKKADPKVQALKTAKAVKSGRT-FKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 M+P K + TKK+D K QALKTAKAVKSG T FKK KKIRTSVTFHRP+TL KDRNPKYPRISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVF MYDIQ KKVNTLIRPDGTKKAYVRLTPD DALDVANKIGII Sbjct: 1 MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_TOBAC (60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.708e-56 Identity = 117/154 (75.97%), Postives = 122/154 (79.22%), Query Frame = 3 Query: 102 MAPPKGE-TKKADPKVQALKTAKAVKSGRTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 MAP K + +KK+DPK QA K AKAVKSG T KK ++KIRT VTFHRPKTLKKDRNPKYPRISAP RNKLD Y ILKYPLTTESAMKKIEDNNTLVF MYDIQ KKVNTLIRPDGTKKAYVRLTPD DALDVANKIGII Sbjct: 1 MAPAKADPSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPRISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: R23A1_ARATH (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.446e-55 Identity = 116/154 (75.32%), Postives = 121/154 (78.57%), Query Frame = 3 Query: 102 MAPPKGET-KKADPKVQALKTAKAVKSGRTFKKA-KKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 M+P K +T KKADPK +ALK AKAVKSG+ FKK KKIRT VTFHRPKTL K R KYP+ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVF MYDIQ KKVNTLIRPDGTKKAYVRLTPD DALDVANKIGII Sbjct: 1 MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: R23A2_ARATH (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.888e-55 Identity = 116/154 (75.32%), Postives = 121/154 (78.57%), Query Frame = 3 Query: 102 MAPPKGE-TKKADPKVQALKTAKAVKSGRTFKK-AKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 M+P K + TKKADPK +ALK AKAVKSG+ KK AKKIRT VTFHRPKTL R PKYP+ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVF MYDIQ KKVNTLIRPDGTKKAYVRLTPD DALDVANKIGII Sbjct: 1 MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_RAT (60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44 Identity = 98/156 (62.82%), Postives = 105/156 (67.31%), Query Frame = 3 Query: 90 RRRTMAPPKGETKKADPKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 ++ APPK E K +ALK KAV G K KKIRTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVF +YDI KVNTLIRPDG KKAYVRL PD DALDVANKIGII Sbjct: 6 KKEAPAPPKAEAK-----AKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_MOUSE (60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44 Identity = 98/156 (62.82%), Postives = 105/156 (67.31%), Query Frame = 3 Query: 90 RRRTMAPPKGETKKADPKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 ++ APPK E K +ALK KAV G K KKIRTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVF +YDI KVNTLIRPDG KKAYVRL PD DALDVANKIGII Sbjct: 6 KKEAPAPPKAEAK-----AKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_HUMAN (60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44 Identity = 98/156 (62.82%), Postives = 105/156 (67.31%), Query Frame = 3 Query: 90 RRRTMAPPKGETKKADPKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 ++ APPK E K +ALK KAV G K KKIRTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVF +YDI KVNTLIRPDG KKAYVRL PD DALDVANKIGII Sbjct: 6 KKEAPAPPKAEAK-----AKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL23A_BOVIN (60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44 Identity = 98/156 (62.82%), Postives = 105/156 (67.31%), Query Frame = 3 Query: 90 RRRTMAPPKGETKKADPKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 ++ APPK E K +ALK KAV G K KKIRTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVF +YDI KVNTLIRPDG KKAYVRL PD DALDVANKIGII Sbjct: 6 KKEAPAPPKAEAK-----AKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of DC900350 vs. ExPASy Swiss-Prot
Match: RL25_PUCGR (60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 6.747e-37 Identity = 84/158 (53.16%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 108 PPKGETKKADPKVQALKTA--------KAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 557 PPK TK A+PK + KT KAV G + K ++IRTSVTF RPKTL+ R PKYPR S P ++D Y+ L PL TESAMKKIEDNNTL+F +YD+ +VNTLIRPDG KKA+VRLTP+ DALD+ANKIG I Sbjct: 2 PPKSSTK-AEPKASSAKTQVAKAKSAKKAVVKGTSSKTQRRIRTSVTFRRPKTLRLSRKPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158 The following BLAST results are available for this feature:
BLAST of DC900350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900350 ID=DC900350; Name=DC900350; organism=Citrus sinensis; type=EST; length=697bpback to top |