DC900316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SMUF1_HUMAN (E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.113e-22 Identity = 49/97 (50.52%), Postives = 70/97 (72.16%), Query Frame = -1 Query: 324 AASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGS---QKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 605 A S +++WFW+ V+ F +E +ARLLQFVTG+++VPL+GF ALQG +G+ + F IH + D+LP AHTCFN++D P Y S + L E+LL A+ E Sbjct: 654 ADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE 750
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: NEDD4_HUMAN (E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 8.722e-22 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = -1 Query: 309 SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 617 +GYSA VIQWFW+ V E + RLLQFVTGTS+VP+ GF+ L G +G Q F + + +G+ + LP AHTCFN+LD P Y S + L ++L +AI E +GF Sbjct: 1215 NGYSANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQ-WGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAI-ENTQGF 1315
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.943e-21 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ +S IQWFW+VV+ E + RLLQFVTGT ++P+ GF+ L G +G QKF I + G LP +HTCFN+LD P Y S + L+E+LL AI E EGFG Sbjct: 769 YTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDRV-GKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEE-TEGFG 868
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: NEDD4_DROME (E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.943e-21 Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = -1 Query: 309 VIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 593 +IQWFW V FS E ++RLLQFVTGTS+VP+ GF L G +G Q F I K +G+ ++ P AHTCFN+LD P Y L+++L+ AI EG++GF Sbjct: 911 IIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEK-WGTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIKAI-EGSQGF 1003
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.538e-21 Identity = 54/102 (52.94%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ S IQWFW+VV+ E + RLLQFVTGT ++P+ GF+ L G +G QKF I K G LP +HTCFN+LD P Y S + L E+LL AI E EGFG Sbjct: 769 YTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKV-GKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEE-TEGFG 868
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: ITCH_MOUSE (E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.314e-21 Identity = 52/102 (50.98%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ S I WFW+ V+ E + RLLQFVTGT ++P+ GF+ L G +G QKF I K G + LP +HTCFN+LD P Y S + L+E+LL AI E EGFG Sbjct: 763 YTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKV-GKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 862
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: ITCH_HUMAN (E3 ubiquitin-protein ligase Itchy homolog OS=Homo sapiens GN=ITCH PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.314e-21 Identity = 52/102 (50.98%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ S I WFW+ V+ E + RLLQFVTGT ++P+ GF+ L G +G QKF I K G + LP +HTCFN+LD P Y S + L+E+LL AI E EGFG Sbjct: 802 YARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKV-GKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 901
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: NEDD4_RAT (E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.383e-21 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = -1 Query: 309 SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 617 +GYS VI WFW+ V E + RLLQFVTGTS+VP+ GF+ L G +G Q F + + +G+ D LP AHTCFN+LD P Y S L ++L +AI E +GF Sbjct: 783 NGYSLNHQVIHWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQ-WGTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAI-ENTQGF 883
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: NEDD4_MOUSE (E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 7.383e-21 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = -1 Query: 309 SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 617 +GYS VI WFW+ V E + RLLQFVTGTS+VP+ GF+ L G +G Q F + + +G+ D LP AHTCFN+LD P Y S L ++L +AI E +GF Sbjct: 783 NGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQ-WGTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAI-ENTQGF 883
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ S I WFW+ V+ E + RLLQFVTGT ++PL GF+ L G +G QKF I K G LP +HTCFN+LD P Y S + L+E+LL AI E EGFG Sbjct: 817 YTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKV-GKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 916 The following BLAST results are available for this feature:
BLAST of DC900316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900316 ID=DC900316; Name=DC900316; organism=Citrus sinensis; type=EST; length=632bpback to top |