DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 4.967e-99 Identity = 166/231 (71.86%), Postives = 189/231 (81.82%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 695 Y+GG W +AHATFYGG DASGTM GACGYGNLYSQGYG NTAALSTALFNNGLSCGACFEI+C N+ WC GS I+VTATNFCPPN ALP++ GGWCNPP+ HFDL+ P+F +IA+YRAGIVPV+YRRVPC ++GGIRFTING YFNLVL+TNV GAGD+ VKGSRTGW +MSRNWGQNWQSN+ L GQSLSF+V SD ++ S N+ A W FGQTF G R Sbjct: 22 YAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGS--IVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQLR 250
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.107e-98 Identity = 165/229 (72.05%), Postives = 188/229 (82.10%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 695 GG W +AHATFYGG DASGTM GACGYGNLYSQGYG +TAALSTALFNNGLSCG+CFEI+C N+ WC GS I+VTATNFCPPN AL ++NGGWCNPP HFDLA P+F +IA+YRAGIVPVSYRRVPCR++GGIRFTING YFNLVL+TNV GAGD+ +KGSRT W +MSRNWGQNWQSN+ L GQ+LSF+V SD R+ S+N PA W +GQTF G FR Sbjct: 23 GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGS--IVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 7.930e-97 Identity = 162/231 (70.13%), Postives = 188/231 (81.39%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 695 YS G W +A ATFYGG+DASGTM GACGYGNLYSQGYG NTAALSTALFN G SCGACF+IKC ++P WC G+ I VT TNFCPPN+A ++ GGWCNPP+ HFDLA P+FL+IA+Y+AG+VPV YRRV CR+KGGIRFTING YFNLVL+TNVAGAGD++ V++KG+ T W SMSRNWGQNWQSNA L GQ+LSF+V SD R+ S N P NW FGQT+ GK FR Sbjct: 25 YSSG-WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGT--ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.654e-94 Identity = 159/228 (69.74%), Postives = 184/228 (80.70%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRT-GWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 G WQ HATFYGG DASGTM GACGYGNLY QGYG NTAALSTALFNNGL+CGAC+E+KC ++P WC + I VTATNFCPPN L +DNGGWCNPP HFDLA P FL+IA+YRAGIVPVS+RRVPC KKGGIRFTING YFNLVL++NV GAGD+ V++KGS+T W +MSRNWGQNWQSN+ + QSLSF+V SD R+ S ++ P+NWQFGQT+ G F Sbjct: 28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGST--ITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 344.354 bits (882), Expect = 3.684e-94 Identity = 160/228 (70.18%), Postives = 188/228 (82.46%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 G W+ HATFYGG+DASGTM GACGYGNL+SQGYG+ TAALSTALFN+G CGACFE++C ++P WC GS I+V+ATNFCPPN+AL +DNGGWCNPP HFDLA P FL+IA+YRAGIVPV++RRVPC K GGIRFTING YF+LVL+TNV GAGDI V++KGS+T W SMSRNWGQNWQSN L GQSLSF+V SD R+ S+++VP +WQFGQTF G F Sbjct: 30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGS--IIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.828e-93 Identity = 164/230 (71.30%), Postives = 182/230 (79.13%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSP-SILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRT-GWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 GG W SAHATFYGG DASGTM GACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE++C HS P S++VTATNFCPPN ALPSD+GGWCNPPR HFD++ P+F +IA ++AGIVPVSYRRV C+KKGGIRFTING YFNLVLVTNV GAGD+ V VK R+ W ++SRNWGQNWQS A+L GQ+LSFRV D RS S N VP W FGQTF G F Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQF 290
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 6.947e-93 Identity = 160/234 (68.38%), Postives = 182/234 (77.78%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAW-CHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG------WMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 G WQ HATFYGG DASGTM GACGYGNLYSQGYG +TAALSTALFN GLSCG+C+E++CA + C G ++ VTATNFCPPNYALPSD GGWCNPPR HFDLA P FL+IA + AGIVPVS+RRV C +KGG+RFT+NG YFNLVLVTNV GAGD+ + VKGS +G W MSRNWGQNWQSNA L G++LSFRV A D RS T ++ PA WQFGQTF G+ F Sbjct: 26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 1.602e-89 Identity = 155/228 (67.98%), Postives = 177/228 (77.63%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 695 GPW +AHATFYGG DASGTM GACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFE+ C N+P WC G SI+VTATNFCPP GG C+PP HFDL+ P++ KIA Y++GI+PV YRRV C++ GGIRFTING YFNLVLVTNV GAGD+ V++KGSRT W MSRNWGQNWQSN+ L GQSLSF V SDRRS S+N+ P W FGQT+ G FR Sbjct: 36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 328.176 bits (840), Expect = 2.732e-89 Identity = 155/225 (68.89%), Postives = 175/225 (77.78%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 W S ATFYGGSDASGTM GACGYGNLYS GYG +TAALSTALFNNG SCGACFE++C + C +G+ + VTATN CPPNYAL D GGWCNPPRPHFD+A P F +IA+ RAG+VPV YRRV C K+GGIRFTI G YFNLVLVTNV GAGD+ V+VKGSR+GW +MS NWG NWQ+ A L GQ LSFRV ASD R+ TS N+ P+ W FGQTF G F Sbjct: 27 WSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGT--VAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 315.464 bits (807), Expect = 1.832e-85 Identity = 148/227 (65.20%), Postives = 174/227 (76.65%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEP--AWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 ++ W A ATFYGGSDASGTM GACGYG+LYS GYG NTAALST LFN+G SCG C+ I C + +C SG+ S+ +TATN CPPNYALP+D GGWCNPPR HFD+A P +LKI Y GIVPV Y+RVPC K+GG+RFTING YF LVLV+NV G G I V++KGSRTGWM+MSRNWG NWQSNA L GQSLSF+V +SD ++ T ++ PA W FGQTF Sbjct: 29 FTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTF 254 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |