DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 4.311e-127 Identity = 205/232 (88.36%), Postives = 221/232 (95.26%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 698 YSGG WQ+AHATFYGGSDASGTM GACGYGNLYSQGYG NTAALSTALFNNG+SCGACFE+KCAN+P WCHSGSPSIL+TATNFCPPN A PSDNGGWCNPPR HFDLAMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVL+TNVAGAGDI+R +VKGSRTGWMS+SRNWGQNWQSNAVLVGQ+LSFRV SDRR+STSWN+VP+NWQFGQTFVGKNFRV Sbjct: 26 YSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV 257
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 449.514 bits (1155), Expect = 8.130e-126 Identity = 202/232 (87.07%), Postives = 221/232 (95.26%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 698 Y+GG W++AHATFYGGSDASGTM GACGYGNLYSQGYGVNTAALSTALFNNG SCGACFE+KCA++P WCHSGSPSI +TATNFCPPN+A PSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNLVLVTNVAGAG+I+R+ VKG+ T WM+MSRNWGQNWQSN+VLVGQSLSFRV +SDRRSSTSWNI PANW+FGQTF+GKNFRV Sbjct: 26 YNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV 257
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 441.425 bits (1134), Expect = 2.214e-123 Identity = 202/234 (86.32%), Postives = 213/234 (91.03%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAW--CHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 698 Y GG WQSAHATFYGGSDASGTM GACGYGNLYSQGYGVN AALSTALFN+G SCGACFEIKC N+P W CH GSPSIL+TATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFL IAEYRAGIVPVSYRRVPCRKKGG+RFTINGFRYFNLVL+TNVAGAGDI+R +VKG+ TGWM MSRNWGQNWQSN+VLVGQ+LSFRV SDRR+STSWN PA W FGQTF GKNFRV Sbjct: 31 YGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 5.454e-122 Identity = 201/232 (86.64%), Postives = 213/232 (91.81%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 698 YSGGPWQ+AHATFYGGSDASGTM GACGYGNLYSQGYGVNTAALSTALFNNG SCGACFEIKC ++P WC G+PSILVTATNFCPPN+A PSD+GGWCNPPR HFDLAMPMFLKI YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVLVTNVAGAGDI V+VKGS+T W+ MSRNWGQNWQSNAVL+GQSLSFRV ASDRRSSTSWN+ PA WQFGQTF GKNFRV Sbjct: 31 YSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFRV 262
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 436.032 bits (1120), Expect = 9.302e-122 Identity = 196/232 (84.48%), Postives = 214/232 (92.24%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 698 +SGG WQ+AHATFYGG+DASGTM GACGYGNLYSQGYG NTAALST+LFN+G SCGACFEIKC N+P WCH G+PS+ VTATNFCPPN A PSDNGGWCNPPR HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVL+TNVAGAGDI R +VKGS+TGWMS++RNWGQNWQSNAVLVGQSLSFRV +SDRR+STSWNI P+NWQFGQTFVGKNFRV Sbjct: 29 FSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV 260
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 421.394 bits (1082), Expect = 2.371e-117 Identity = 190/232 (81.90%), Postives = 212/232 (91.38%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 698 Y+GGPW +AHATFYG +DASGTM GACGYGNLYSQGYGVNTAALSTALFNNGLSCG+CFE+KC N+P WC G+PSIL+TATNFCPPN+ SDNGGWCNPPR HFDLAMPMFL IA+Y+AGIVPVSYRR+PCRKKGGIRFTINGF+YFNLVLVTNVAGAGD+++V+VKGS T W+ +SRNWGQNWQSNA+LVGQSLSFRVK SD RSSTS NI P+NWQFGQT+ GKNFRV Sbjct: 27 YTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 2.634e-100 Identity = 170/227 (74.89%), Postives = 189/227 (83.26%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 G WQSAHATFYGG DASGTM GACGYGNLYSQGYG NTAALSTALFN+G +CG+C+E++C N + C GS I VTATNFCPPNY LPSD+GGWCNPPRPHFD+A P FL IA+YRAGIVPVS+RRVPC KKGG+RFT+NG YFNLVLVTNVAGAGD+ V++KGSRTGW MSRNWGQNWQSNA L GQSLSF+V ASD R+ TS N+ WQFGQTF G F Sbjct: 22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 2.634e-100 Identity = 170/227 (74.89%), Postives = 189/227 (83.26%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 G WQSAHATFYGG DASGTM GACGYGNLYSQGYG NTAALSTALFN+G +CG+C+E++C N + C GS I VTATNFCPPNY LPSD+GGWCNPPRPHFD+A P FL IA+YRAGIVPVS+RRVPC KKGG+RFT+NG YFNLVLVTNVAGAGD+ V++KGSRTGW MSRNWGQNWQSNA L GQSLSF+V ASD R+ TS N+ WQFGQTF G F Sbjct: 22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 364.77 bits (935), Expect = 2.634e-100 Identity = 168/227 (74.01%), Postives = 187/227 (82.38%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 G WQSAHATFYGG DASGTM GACGYGNLYS GYG NTAALST LFN+G +CG+C+E++C N+ WC GS + VTATN CPPNYALP+D+GGWCNPPRPHFD+A P FL+I YRAGIVPVSYRRVPC KKGGIRFTING YFNLVLVTNVAG GD+ V++KGS TGW MSRNWGQNWQSN+ L GQSLSF+V SD R+ TS N+VPA WQFGQTF G F Sbjct: 27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGS--VTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 362.459 bits (929), Expect = 1.307e-99 Identity = 170/231 (73.59%), Postives = 192/231 (83.12%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 695 Y G W +AHATFYGGSDASGTM GACGYGNLYSQGYG NTAALSTALFNNGLSCGACFEIKC ++ AWC G+ I+VTATNFCPPN ALP++ GGWCNPP HFDL+ P+F +IA+Y+AG+VPVSYRRVPC ++GGIRFTING YFNLVLVTNV GAGD+ V VKGSRT W MSRNWGQNWQSN +L GQ+LSF+V ASD R+ S NI PA+W FGQTF G+ FR Sbjct: 26 YDAG-WVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGA--IIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |