DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.082e-85 Identity = 148/225 (65.78%), Postives = 170/225 (75.56%), Query Frame = 3 Query: 6 SGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 S W A ATFYGGSDASGTM GACGYG+LY GYG TAALSTALFN G SCGACF I C + WC G+ SI VTATNFCPPNYAL D GGWCNPPR HFD++ P + IA YRAGIVPV+YRRVPC++ GGIRF +NG YF LVLVTNV G+G + ++ +KGS TGWM+MSRNWG NWQSNA L GQ+LSFRV+A D R T+ ++ PA W FG T+ Sbjct: 21 SAAKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATY 244
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 4.082e-85 Identity = 145/229 (63.32%), Postives = 176/229 (76.86%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSR--TGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 ++ W ATFYGGSDASGTM GACGYGNLY+QGYG TAALSTALF++G SCG C+ + C +P WC +G+ S+ VTATNFCPPNYALPSD+GGWCNPPRPHFD+A P + +I YR GIVPV++RRVPCR++GG+RFT+ G YF LVLVTNVA AG + + V+GSR GWM+MSRNWG NWQS A L GQ LSFRV A+D ++ +VP +W+FGQTF Sbjct: 29 FAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGA-SVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTF 256
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.082e-85 Identity = 147/238 (61.76%), Postives = 174/238 (73.11%), Query Frame = 3 Query: 6 SGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSG------SPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVK---GSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 + G W AHATFYGG+DASGTM GACGYGN Y QGYG +TAALS +F +GLSCGACFE++C G SI+VTAT+ CP N+ALP D GGWCNPP HFDL+ P FL+IA +++GIVPVSYRRV CR+KGG+RFTING YFNLVLV+NV GAGD+ V VK G + W +M+RNWGQNWQS A+L GQ+LSF V DRRS S+N+ PA W FGQTF G+ F Sbjct: 26 AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 5.331e-85 Identity = 145/223 (65.02%), Postives = 175/223 (78.48%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W AHATFYGGSDASGTM GACGYGNLY+ GY NTAALSTALFN+G SCG C++I C P WC G SI +TATNFCPPN+A SDNGGWCNPPRPHFD+A P FL IA+Y+AGIVP+ Y++V CR+ GG+RFTING YF LVL++NVAG G+I +V +KGS++ W +MSRNWG N+QSN L GQSLSF+V+ SD + N+VP+NW+FGQ+F Sbjct: 28 WLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGK-SITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 1.551e-84 Identity = 147/226 (65.04%), Postives = 168/226 (74.34%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 WQ AHATFYGG+DASGTM GACGYGNLYSQGYG AALSTALFN+G SCG C++I C + P WC G ++ +TATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI Y AGI+PV Y+RVPC KKGG+RFTING YF LVLVTNVA AG I + V GS T WM M+RNWG W S A L GQ LSFRV +D ++ N+VP W+FGQTF K Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGV-TVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASK 263
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 311.997 bits (798), Expect = 2.026e-84 Identity = 139/220 (63.18%), Postives = 171/220 (77.73%), Query Frame = 3 Query: 21 QSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 QSA ATFYGG D SGTM GACGYGNLY+ GYG+ AALS+ALFN+G CGAC+ I C ++ WC G SI +TATN CPPN+ALPS++GGWCNPPR HFD++ P + IA Y+AGIVPV+Y+RVPC++ GGIRF I+G YF LV VTNV G+G + ++++KGS TGWM+MSRNWG NWQSNA L GQSLSF V+ D R T+WN+ P+NW FG T+ Sbjct: 29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATY 248
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.313e-83 Identity = 141/221 (63.80%), Postives = 170/221 (76.92%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W A ATFYGGSD +GTM GACGYGNLY+ GYG+N AALS+ALFN+G CGAC+ I C ++ WC G+ SI +TATN CPPNYA SD GGWCNPPR HFD++ P + IA Y+AGIVPV+++RVPC+K GGIRFTI+G YF LV V NV G+G + +V++KGS+T WM+MSRNWGQNWQSNA L QSLSF+VK D R T WNI P+NW FG T+ Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTY 242
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 308.916 bits (790), Expect = 1.715e-83 Identity = 145/226 (64.16%), Postives = 169/226 (74.78%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSR-TGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 WQ AHATFYGG+DASGTM G CGYG+LYSQGYG AALSTALFN+G SCG C++I C + P WC G ++ +TATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI Y AGI+PV Y+RVPC KKGG+RFTING YFNLVLVTNVA G I +++ GS T WM M RNWG NW S + L GQ+LSFRV D ++ NIVP+ W+FGQTF K Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGV-TVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFTSK 258
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 4.990e-83 Identity = 136/232 (58.62%), Postives = 174/232 (75.00%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGS-RTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF-VGKNF 692 ++ GPW+ AHATFYGG D SGT++GACGY + +GYGV T A+ST LF G CGAC+E+KC + P C G+ ++VTATN CPPN +DNGGWCNPPR HFDL+MP FL+IA+ +AGIVP+SYRRVPC K GGIR+TI G YFNLV+V+NV GAGD+ ++VKG+ R W + RNWGQ WQ++ VL G+SL+FRV D R +TSW+++P +WQFG T+ KNF Sbjct: 37 FTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQATKNF 268
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 4.990e-83 Identity = 146/226 (64.60%), Postives = 169/226 (74.78%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSR-TGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 W AHATFYGG+DASGTM GACGYG+LYSQGYG AALSTALFN+G SCG C++I C + P WC G ++ +TATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI YRAGI+PV Y+RVPC KKGG+RFTING YFNLVLVTNVA G I ++V GS T W+ M RNWG NW S + L GQ LSFRV D ++ NIVP+ W+FGQTF K Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGV-TVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASK 276 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |