DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.488e-66 Identity = 122/224 (54.46%), Postives = 158/224 (70.54%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGG--WCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKA-SDRRSSTSWNIVPANWQFGQTF 677 W AHATFYG AS TM GACGYGNLY+ GYG +TAALST LF +G CG C++++C A C+ GSP+I VTATN CPPN+A D GG WCNPPR HFDL+ P F+++A++RAGIVPV YRRVPC + GG+RF + G Y+ L V NVAGAGD+ + VK G GW+ MS NWG ++Q+ A L GQ+LSF+V + + ++ + + PA+W FG T+ Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGT-ASCYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTY 259
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 5.543e-66 Identity = 112/225 (49.78%), Postives = 157/225 (69.78%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 W+SA A++Y +D + GACG+G+L GYG+ T LSTALF G +CG C+E+KC ++ +C G+ SI+VTATNFC PN+ LP+D GG CNPP HF L + F KIA ++AG++P+ YRRV C + GG+RF + G +F VL++NV GAGD+ V +KG+ +GW+SM RNWGQ W N+ GQ LSF + +SD ++ T++N+VP W FG+T+ GK F Sbjct: 33 WRSAKASYYA-ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.751e-65 Identity = 121/222 (54.50%), Postives = 149/222 (67.12%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W ATFYGG+D SGTM GACGYGNLY Q YG+N AALST LFN+G SCG C+ I C P WC G +I VT TN+ GGWCN RP+FD++ P + I Y AGIVP+ Y++V C + GG+RF INGF YF LVLVTN+AG+G I+ ++VKGS TGW+ M+RNWG NWQ A L GQ+LSF V ++ ++ + VPA W FGQTF Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTF 232
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 3.972e-64 Identity = 120/224 (53.57%), Postives = 150/224 (66.96%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGT-MEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 W A A +YG GT +EGACGYG+L GYG+ TAALSTALFN+G SCGAC+EI C+ P C SGS I +TAT+ CPP A WC P HFDL++PMF+KIA+ +A +VPV YRRVPC K GG++F + G +L NV GAGDI+ V+ KGS+T W+ MSR WGQNW +N L GQS+S RV SD + +++PA+W FGQTF GK Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGS--IKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDGK 259
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.847e-62 Identity = 109/227 (48.02%), Postives = 149/227 (65.64%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 W+ A AT D S ++ GACGYG+L + +A LS LFN G SCGAC E++C N WC GSPS++VTAT+FCPPN L SD GGWCN P+ H +L+ F IAE RA ++P+ YRRV C ++GG+RF+++G +F VL++NV G+++ V VKG T W+ M+RNWGQNW S+ L+GQSLSF V ++ S+++ P W+FG T+ GK F Sbjct: 28 WKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.718e-62 Identity = 108/206 (52.43%), Postives = 140/206 (67.96%), Query Frame = 3 Query: 75 GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 692 GACGYG+L YG TA +S ALF G +CG C+E++C N WC GSP+++VTAT+FC PN L D GGWCN P+ HF+++ FL++A+ +A IVPV +RRV C + GG+RFTI G F VL+TNVA G++ V VKGSRTGW+ M RNWGQNWQ +A L GQ LSF V R+ ++++ P +W F QTF GK F Sbjct: 53 GACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.718e-62 Identity = 112/224 (50.00%), Postives = 154/224 (68.75%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEY-RAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSR-TGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W AHAT+YG +D+ ++ GACGY N Y G+G +TAALS LF +G SCG C++++C +P WC G+ ++ VTATNFCP N +N GWCN PR HFD++ P F +IA GIVPV YRRV C+++GG+RFT+ G FN+V+++NV G G + V V+GS+ W+ M+RNWG NWQS+ L GQ LSF+V +D ++ T N+VP++W FGQTF Sbjct: 27 WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGA-AVTVTATNFCPTN-----NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTF 244
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.791e-56 Identity = 111/230 (48.26%), Postives = 146/230 (63.48%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEG-ACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGS-RTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 Y GPW HATFYGG DASGT EG ACGY + + GYG TAA+S ALF+NG CGAC+E+K +++VTATN PP NG HFDL MP FL IAE + G+VPVSYR+V C ++GGI++TI G +N+V+V NV GAGD++++ VKG+ R W + R+WGQ W++ A L G+SL+FRV D R +TSW + P +W + T+ K Sbjct: 77 YKCGPWVDGHATFYGGRDASGTTEGGACGYKD--ADGYGAMTAAVSPALFDNGAGCGACYELK--------GDSGKTVVVTATNQAPPPV-----NG----MKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTYQAK 287
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.416e-53 Identity = 105/236 (44.49%), Postives = 141/236 (59.75%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGT-MEGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG--WMSMSRNWGQNWQSNAVL---VGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKN 689 Y W ATFYG G GACGY N Y TAALST LF +G CG C+E++C P WC+ GSPS+++T TN CPPN+ LP+D+GGWCNPPR HFD+A P FLK+A+ AGIVPV YRRVPC++ GG+RF + G Y+ L+ V NV GAGD+ ++VK S G W+ + NWG +Q A L G ++ ++ +++ + + W G + G N Sbjct: 47 YKTSDWHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWWITGLCYQGSN 281
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.927e-26 Identity = 76/238 (31.93%), Postives = 120/238 (50.42%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG---GIRFTINGFRYFNLVLVTNVAGAGDILRVNV-----KGSRTGWMSMSRNWGQNWQSNA--VLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W AT+YG ++ SGT GACGY G++ + AA S +++ +G CG+C+++KC+ P+ SG P + V T+ CP GG C HFDL+ F +A+ AG +PV Y RVPC+ +G R +Y+ VLV + G GD+ V++ G W +M ++WG W+ N+ + +S R+ + R+ + N++PA WQ G T+ Sbjct: 38 WSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSC--SGKP-VTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTY 263 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |