DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13 Identity = 62/228 (27.19%), Postives = 110/228 (48.25%), Query Frame = 3 Query: 24 SAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-YRAGIVPVSYRRVPC---RKKGGIRF--TINGFRYFNLVLVTNVAGAGDILRVNV-KGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKAS---DRRSSTSWNIVPANWQFGQTF 677 S+ A ++ S AS GAC YG++ + + + AA +++ +G CGACF+++C N P C S +++VT N + S R +A P+ + + GIV + YRRVPC KK +R + Y + L+ G +++ + + + + W M+R+ G W ++ V G +L FR + D + S ++PANW+ G+++ Sbjct: 28 SSKAAYF--SSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKN-PTLCSSKGTTVIVTDLNKTNQTDLVLSS--------RAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQ-GGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNG-ALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSY 242
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 60/220 (27.27%), Postives = 103/220 (46.82%), Query Frame = 3 Query: 51 SDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEY--RAGIVPVSYRRVPC---RKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG---WMSMSRNWGQNWQSNAVLVGQSLSFRVKAS---DRRSSTSWNIVPANWQFGQTF 677 S AS GAC YG + + + + AA +++ +G CGACF+++C N P C+S ++VT N S+ R +A P+ + + +Y + GIV V Y+RVPC ++ +R + N + + + G V + + G W MSR+ G W ++ V G +L F+ + D ++ S ++PANW G+ + Sbjct: 34 SSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKN-PKLCNSKGTIVMVTDLN--------TSNQTDLVLSSRAFRAMAKPV-VGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVE-EASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTG-ALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIY 241
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 56/220 (25.45%), Postives = 104/220 (47.27%), Query Frame = 3 Query: 51 SDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-YRAGIVPVSYRRVPC---RKKGGIRFTINGFR--YFNLVLVTNVAGAGDILRVNVK--GSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKAS---DRRSSTSWNIVPANWQFGQTF 677 S AS GAC YG++ + + + AA +++ +G CGACF+++C N P C + +++T N S+ R +A P+ + + GIV + Y+RVPC K +R + Y + L+ G +++ +++ GS W M+R+ G W ++ V G ++ FR + D + S +++P+NW+ G+ + Sbjct: 34 SSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKN-PKLCSTKGTIVMITDLN--------KSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQ-GGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTG-AIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIY 242
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 60/227 (26.43%), Postives = 92/227 (40.53%), Query Frame = 3 Query: 27 AHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCR-KKGGIRFTINGFRYFNLVLVTNV---AGAGDILRVNV-KGSRTGWMSMSRNWGQNWQSNAVLVGQ-SLSFRVKASDRRSSTSW----NIVPANWQFGQTF 677 + A +Y SD GT GAC YG + + S +L+ +G+ CGAC++++C N P +C +I++T + SD + +A A G+V + YRRV C I F I F L + G DI+ V + + +SR G W + + G S+ + R +W NIVP NW G T+ Sbjct: 31 SRAAYYPNSDIKGTENGACEYG-AFGATLNNGDVSASASLYRDGVGCGACYQVRCTN-PYYCSPNGVTIVITDSG--------ASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATY 247
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPL5_DICDI (Expansin-like protein 5 OS=Dictyostelium discoideum GN=expl5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 60/196 (30.61%), Postives = 90/196 (45.92%), Query Frame = 3 Query: 3 YSGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVN--TAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVP-VSYRRVPCRKKGGIRFTI--NGFRYFNLVLVTNVAGAGDILRVNVK--GSRTGWMSMSRNWGQNWQSN 569 YS A ATFY D G CG+G L N AAL T L+ NG CG CF+I +S + S+ V AT+ C ++ G+C HFDL+ F + G++ +SY +VPCR G ++ + Y+ LV N A D+ +V++K GS T ++ +++ W S+ Sbjct: 27 YSKTVINGASATFYSAMD-----NGNCGFGKLTGPTGPGNYMIAALGTKLYQNGAQCGQCFKIS--------NSKNASVTVMATDSC--------NDAGYCQRDN-HFDLSPTAFSILGAQSQGVLDGLSYVKVPCRVSGNVKVMLKDGSNAYWTSFLVFN--NAIDVKQVSIKLSGSST-YVPLTQTTYNYWPSS 197 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |