DC900257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25 Identity = 67/150 (44.67%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGE-QWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQ 439 H G +V W+P G++VG +KLA+ GCDN VK+W G+ L H DW R VAWAP++GL K+ +ASASQD V IWT KEG+ W+ L + K P W VSWSL+GN+LAV+ +N V L+KE+ +WQ Sbjct: 144 HEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWT--KEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKES-QNKWQ 290
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_PHANO (Protein transport protein SEC13 OS=Phaeosphaeria nodorum GN=SEC13 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25 Identity = 67/152 (44.08%), Postives = 88/152 (57.89%), Query Frame = 2 Query: 11 GVTSVSWAPAMAPGALVGL--GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 GV SVSWAPA+APG +V ++ + G D VK+W L H+DWVR VAW+P + L KS IASASQD TV IWT + + W+ VL + W VSWSL+GN+LAV+ +N V+LWKE + G W+ V +E Sbjct: 153 GVNSVSWAPAVAPGQVVSASGNQAGAARRFVTGGSDCQVKLWDFSAETGSWQSTQILTGHTDWVRDVAWSPTV-LSKSYIASASQDKTVRIWT-SSDLRDWKSTVL-NVDAVAWRVSWSLSGNVLAVSTGDNRVSLWKERLSGGWECVKTIE 301
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.109e-24 Identity = 63/157 (40.13%), Postives = 94/157 (59.87%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKM--YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H +G S +WAP L +++ SCG DN K+WK N + + L+ H+DWVR VAW+P+ L +S IA+ASQD TV+IWT ++G +W+ ++L + K P W SWSL+GN+LAV+ +N V+LWKE + G+W+ V+ Sbjct: 147 HAIGANSATWAPVSTSSK--DSAALKQQRRIVSCGSDNLAKIWKYDAANNTYVEEA--KLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLIWTQDRDG-KWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEVD 297
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_KLULA (Protein transport protein SEC13 OS=Kluyveromyces lactis GN=SEC13 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24 Identity = 61/158 (38.61%), Postives = 90/158 (56.96%), Query Frame = 2 Query: 2 HPVGVTSVSWAPA----MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +G + WAPA + G V++ + G DN VK+WK + L+ HSDWVR VAW+P + L +S +AS SQD T +IWT + + W+ +LK+ K P +W SWSL+GN+LA++ +N VTLWKE ++G+W+ V Sbjct: 144 HSIGANTACWAPATLQQQSNQGTSGSASPQQVRRFVTGGADNLVKIWKYNSDAATYLLEHTLEGHSDWVRDVAWSPTV-LSRSYLASVSQDRTCIIWTQDSKEDTWKKTLLKEDKFPDVLWRASWSLSGNILALSCGDNTVTLWKENLEGKWEPAGQV 300
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H +GV + WAPA ++++A+ G DN VK+WK L H+DWVR VAW+P++ LP++ +A+ SQD T +IWT W +LK+ K P +W SWSL+GN+LA++ +N VTLWKE ++G+W+ + +E Sbjct: 144 HAIGVNAACWAPATIED---DGQQSQHLRRIATGGADNLVKIWKYNPEANTYLLEDTLAAHADWVRDVAWSPSV-LPRAYLATVSQDRTCIIWTQENNQGPWTKTLLKEDKFPDVLWRASWSLSGNILALSGGDNKVTLWKENLEGKWESAAEIE 294
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 63/158 (39.87%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGA--LVGLGLLDPVQKLASCGCDNTVKVWKM--YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +G S SWAP + + L ++ +CG DN K+WK N + + L+ H+DWVR VAW+P++ L ++ IA+ASQD TV+IWT K G +W+ ++L + K P W SWSL+GN+LAV+ +N V+LWKE + G+W+ V Sbjct: 147 HAIGANSASWAPLSSTPSPNQKDAASLKQQRRFVTCGSDNLAKIWKYDAANNTYVEEA--RLEGHTDWVRDVAWSPSM-LVRTYIATASQDRTVLIWTQDKAG-KWQKQLLTEDKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 300
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_DEBHA (Protein transport protein SEC13 OS=Debaryomyces hansenii GN=SEC13 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.601e-23 Identity = 61/155 (39.35%), Postives = 93/155 (60.00%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD--FKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H +GV S SWAP ++ G + +++ +CG DN K+WK + L+ H+DWVR V W+P++ L +S IA+ASQD TV+IW+ G+ W+ ++L + F W SWSL+GN+LAV+ +N V+LWKE + G+W+ VE Sbjct: 147 HAIGVNSASWAP-LSNNNTKGKDT-NSIRRFVTCGSDNLAKIWKFDSSKNAYIEEAVLEGHTDWVRDVCWSPSI-LIRSYIATASQDRTVLIWSQDNNGK-WQKQLLTEEMFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEVE 297
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SC131_CANGA (Protein transport protein SEC13-1 OS=Candida glabrata GN=SEC131 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.091e-23 Identity = 61/154 (39.61%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL--KDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +GV + SWAPA G V++ + G DN VK+W+ L+ HSDWVR VAW+P++ L +S IAS SQD T IWT W L ++F +W SWSL+GN+LA++ +N VTLWKE ++G+W+ V Sbjct: 144 HAIGVNAASWAPATVEGGNNPGEAPKEVRRFVTGGADNLVKIWRYNPETQSYLVEDTLEGHSDWVRDVAWSPSV-LLRSYIASVSQDRTCNIWTQEDNTGPWVKTQLTPEEFPDVLWRASWSLSGNILAISGGDNKVTLWKENLNGKWESAGEV 296
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_CRYNE (Protein transport protein SEC13 OS=Cryptococcus neoformans GN=SEC13 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22 Identity = 62/166 (37.35%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGL-------LDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL---------KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVS 448 H G ++SWAP++ + G+ L P ++ + G DN +++W K ++ H DWVR VAWAPN+GLP IASASQD TV+I + W L F VW VSWSL GN+LAV+ + V+LWKE V W+ VS Sbjct: 171 HGTGANAISWAPSVL-STVSGVSRSQQPSNSLAPQKRFVTAGSDNLIRIWGFDEEQKKWTEEETIKGHEDWVRDVAWAPNIGLPGMYIASASQDRTVLIHSRPSPSSSWTSAPLLPSLPQSQDPHFPDAVWRVSWSLAGNVLAVSCGDGKVSLWKEGVGKGWECVS 335
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.498e-21 Identity = 60/155 (38.71%), Postives = 86/155 (55.48%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD--FKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H +GV S SWAP + PV++ + G DN KVW + L+ H+DWVR V W+P+ L +S IA+ASQD TV+IW EG+ W+ + L + F W SWS +GN+LAV+ +N V+LWKE + G+W+ V+ Sbjct: 146 HKIGVNSASWAP---------VDTKSPVRRFVTGGSDNLAKVWSLDASKSTYVEEAKLEGHTDWVRDVCWSPS-ALVRSYIATASQDRTVLIWHQDGEGK-WQKQKLTEELFPDVCWRCSWSFSGNILAVSGGDNKVSLWKENLQGKWESAGEVD 289 The following BLAST results are available for this feature:
BLAST of DC900257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900257 ID=DC900257; Name=DC900257; organism=Citrus sinensis; type=EST; length=735bpback to top |