DC900257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +G +VSWAPA+ PG+L+ ++K AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V +WTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 149 HTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38 Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +G +VSWAPA+ PG+L+ ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 149 HTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38 Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +G +VSWAPA+ PG+L+ ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 149 HTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37 Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 454 H +G +VSWAPA+ PG+L+ +++ AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34 Identity = 74/154 (48.05%), Postives = 100/154 (64.94%), Query Frame = 2 Query: 8 VGVTSVSWAPAMAPGALVGLG---LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 +GV SVSW+PA P +LV + P++++ + CDN +K++K W +D L+ H DWVR VAWAPN+GLP S IAS SQD +V++WT + G W G+ L F VW VSWS+ GN+LAV+ +N VTLWKE VD EW+ +S VE Sbjct: 149 IGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHVE 299
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 76/178 (42.70%), Postives = 101/178 (56.74%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGL------------GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL-------------KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 457 HPVG +VSWAPA+ PG+L+ G V++ AS GCDNTVK+W+ + ALQ HSDWVR VA+APN+GLP+S +A+ASQD TV+IWT W L F VW VSWS++GN+LAV+ + +TLWKE + G W+ VS ++ Sbjct: 186 HPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASAAAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECVSEMD 363
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.934e-30 Identity = 74/157 (47.13%), Postives = 95/157 (60.51%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPA--LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H GV SVSWAP+ APG+++ Q+ + G DNT+K+W + C L H+DWV V W+P + L KS IASASQD TV IWT W+ RVLK+F T VW VSWSL+GN+LAV+ +N VTLWKE + GEW V+ +E Sbjct: 140 HGQGVNSVSWAPSTAPGSIISTNATPAAQRRFVTGGSDNTLKIWSWDAASAQYRCEEGGVLSGHTDWVLDVDWSPTV-LQKSYIASASQDRTVRIWTSDSSNPGVWQSRVLKEFDTTVWRVSWSLSGNVLAVSSGDNKVTLWKENLKGEWACVNSLE 295
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29 Identity = 74/158 (46.84%), Postives = 96/158 (60.76%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALVGL--GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H VG S SWAP G+L+ G ++ + GCDN VK+WK L H DWVR VAW+ ++ L KS IASASQD TV++WT +EG Q W+ ++L+D P VW VSWSL+GN+LAV+ +N VTLWKE + GEW+ VVE Sbjct: 143 HDVGANSASWAPPAVSGSLIQPINGKASNNIRIVTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSSV-LSKSYIASASQDKTVIVWT--QEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWESAGVVE 297
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29 Identity = 71/158 (44.94%), Postives = 100/158 (63.29%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALV----GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H +GV S+SWAPA +PG+LV G+G ++ + G DN +K+W + L+ HSDWVR VAW+P++ L KS IASASQD TV +WT A QW +VL +F +W VSWS +GN+LAV+ +N V+LWKE + G+W++V +E Sbjct: 156 HGMGVNSISWAPAASPGSLVSSNPGIG---QQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLRGQWEKVKDIE 308
BLAST of DC900257 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28 Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 2 Query: 2 HPVGVTSVSWAPAMAPGALV----GLGLLDPVQKLASCGCDNTVKVWKM---YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT--CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 457 H +GV SVSWAPA PG++V G G ++ + G DN +K+W NG +K++ P L H+DWVR VAW+P + L KS IASASQD TV IWT A GE W+ +VL +F VW VSWSL+GN+LA + NN VTLWKE + GEW+ V +E Sbjct: 148 HGLGVNSVSWAPATTPGSIVSSNPGPGSTGN-RRFVTGGSDNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGE-WKCKVL-NFDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTIE 303 The following BLAST results are available for this feature:
BLAST of DC900257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900257 ID=DC900257; Name=DC900257; organism=Citrus sinensis; type=EST; length=735bpback to top |