DC900254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.641e-21 Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIK 366 ++R G+ +T++ +G + + + A A++ G+ E+IDL++L P D ET+ ASV+KTGR +I+HEA T GFGAE+ + + E CF LEAP+ RV G DTP+P E Y P ++ A K Sbjct: 227 IVRPGAALTVLTYGTMVYVAQAA---ADETGLDAEIIDLRSLWPLDLETIVASVKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWAYFPGPARVGAAFK 345
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21 Identity = 50/125 (40.00%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTV 375 + R G+D++++ +G + + + A AE+ G+ E+IDL++L P D +T+ SV+KTGR ++ HEA T GFGAE+ + + E CF LEAP+ RV G DTP+P E Y P +++ A+K + Sbjct: 216 ITRPGNDVSVLTYGTTVYVAQVA---AEESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWAYFPGPSRVGAALKKVM 337
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DI+++ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA + A + ER L LEAP+ RV DT +P E ++P KN I++ K T+ + Sbjct: 198 VKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20 Identity = 52/126 (41.27%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 REG DIT++ +GA + +A + EKEGIS E++DL+T+ P D ET+ SV KTGR ++ EA G A + A I ER L LEAPV RV DT +P E ++P +++ K +N+ Sbjct: 200 REGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325 The following BLAST results are available for this feature:
BLAST of DC900254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900254 ID=DC900254; Name=DC900254; organism=Citrus sinensis; type=EST; length=642bpback to top |