DC900254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 2.714e-42 Identity = 79/128 (61.72%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 VI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+T++PWD +TV SV KTGRLLISHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DTPFP +FEPFY+P K K DA++ +NY Sbjct: 263 VIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIPDKWKCYDALRKMINY 390
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.714e-42 Identity = 79/128 (61.72%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 VI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+T++PWD +TV SV KTGRLLISHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DTPFP +FEPFY+P K K DA++ +NY Sbjct: 263 VIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIPDKWKCYDALRKMINY 390
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.714e-42 Identity = 79/128 (61.72%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 VI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+T+IPWD +T+ SV KTGRLLISHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DTPFP +FEPFY+P K K DA++ +NY Sbjct: 265 VIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIPDKWKCYDALRKMINY 392
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 3.545e-42 Identity = 78/128 (60.94%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIM-EQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 VI+EGSD+TLV WG Q+ ++ E A + EK G+SCE+IDL+T++PWD +TV SV KTGRLL+SHEAP+TGGF +EIS+++ E CFL LEAP++RVCG DTPFP +FEPFY+P K K DA++ +NY Sbjct: 265 VIQEGSDVTLVAWGTQVHVIREVAAMAQEKLGVSCEVIDLRTILPWDVDTVCKSVIKTGRLLVSHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIPDKWKCYDALRKMINY 392
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.347e-41 Identity = 80/128 (62.50%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQAC-LDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 +++EG DIT++GWGAQ+ ++ QA + EK GISCELIDL+T+ PWD ETV SV+KTGR++ISHEAP TGG+ AEISA+I ERCFL LEAP+ RVCG DTPFPL+FE FY+P K ++IK T+ Y Sbjct: 243 IVKEGKDITIIGWGAQMRVLLQAVNMAEEKLGISCELIDLRTIQPWDVETVVESVKKTGRVVISHEAPKTGGWAAEISATIQERCFLHLEAPIQRVCGYDTPFPLIFEKFYVPDHLKNFESIKKTMVY 370
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24 Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 REG D+TL+G+G + + QA + K G+S E++DL+TL+PWD E V SV KTGR+++ +AP F +E++A+I E L AP RV G DTP+P + Y+PT +IL+A K ++Y Sbjct: 200 REGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQDKLYLPTVTRILNAAKRALDY 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24 Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 381 REG D+TL+G+G + + QA + K G+S E++DL+TL+PWD E V SV KTGR+++ +AP F +E++A+I E L AP RV G DTP+P + Y+PT +IL+A K ++Y Sbjct: 200 REGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQDKLYLPTVTRILNAAKRALDY 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.078e-22 Identity = 54/128 (42.19%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DITL+ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA+++A + ER L LEAP+ARV DT +P E ++P K I++ K+T+ + Sbjct: 198 VKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPFTQAENVWLPNKKDIIEQAKATLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.078e-22 Identity = 54/128 (42.19%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIKSTVNY 381 V +EG+DITL+ +GA + +A + EK+G S E+IDL+T+ P D +T+ ASV KTGR ++ EA G GA+++A + ER L LEAP+ARV DT +P E ++P K I++ K+T+ + Sbjct: 198 VKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPFTQAENVWLPNKKDIIEQAKATLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.078e-22 Identity = 52/128 (40.62%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPF-PLVFEPFYMPTKNKILDAIKSTVNY 381 ++R G+D T+V W + + +A A +EG S E++DL++L P D V SV+KTGRL+++ EAP G+E++A + E+ F LEAPV RV G DTPF P E Y+P ++IL+ + ++ Y Sbjct: 210 IVRSGTDATIVAWAGMVPVALRAAEIAAEEGRSLEVVDLRSLAPIDYAPVLRSVQKTGRLVVAQEAPGIVSVGSEVAAVVGEKAFYSLEAPVLRVAGFDTPFPPAKLESLYLPDADRILEVVDRSLAY 337 The following BLAST results are available for this feature:
BLAST of DC900254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900254 ID=DC900254; Name=DC900254; organism=Citrus sinensis; type=EST; length=642bpback to top |