DC900254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL-VFEPFYMPTKNKILDAIKSTVNY 381 V REG+D++++ +GA + +A + EK+GIS E++DL+T+ P D +T+ ASV KTGR ++ EA G A + A I +R L LEAPV RV DT FP E ++P +L+ + + + Sbjct: 198 VKREGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPLDIDTIIASVEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPFSQAESVWLPNHKDVLETARKVLEF 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.356e-17 Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 309 V REG D+T+VG+ +S +A KEGIS E+I+L+T+ P D ET+ S++KT +L+ E G GAEISA ++E F L+AP+ R+CG D P P Sbjct: 226 VEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMP 328
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKSTVNY 381 ++REGS +T+V + Q+ + A + + I CE+IDL+T+ P D ET+ SV+KT RL++ E G GA I++ +++ F L+AP+ V G D P P E +P+++ +++A+K Y Sbjct: 196 ILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTIKPLDTETIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYAVNLETLALPSESDVIEAVKKVCYY 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKSTVNY 381 ++REGS +T+V + Q+ + A + + I CE+IDL+T+ P D +T+ SV+KT RL+I E G GA I++ +++ F L+AP+ V G D P P E +P+++ +++A+K Y Sbjct: 196 ILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTIKPLDTDTIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFAVNLEKLALPSESDVIEAVKKVCYY 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.155e-17 Identity = 48/123 (39.02%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAIK 366 V+++G+D+T+V WG+ + +E+A E EGIS E+IDL+T+ P D+ET+ SV+KTG+ ++ EA + G AE+ + E+ F LEA R G D PL E ++ P KI I+ Sbjct: 198 VVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEIIDLRTISPIDEETILNSVKKTGKFMVVTEAVKSYGPAAELITMVNEKAFFHLEAAPVRFTGFDITVPLARGEHYHFPQPEKIAAYIR 320
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.793e-17 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKSTVNY 381 +++EGS++T+V + Q+ + + + I CELIDL+T+ P D +++ SV+KT RL+I E G GA I++ +++ F L+AP+ V G D P P E MP+ N +++A+K Y Sbjct: 196 ILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYY 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIK 366 V++EG +T+V + Q+ + A + + I+CE+IDL+T+ P D +T+ SV+KTGRL++ E G GA I+A +++ F L+APV V G D P P E +P++ +++A+K Sbjct: 196 VLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTIKPLDIDTIIESVKKTGRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPLPYAVNLEKLALPSEYDVINAVK 319
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16 Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKSTVNY 381 +++EGS++T+V + Q+ + + + I CELIDL+T+ P D + SV+KT RL+I E G GA I++ +++ F L+AP+ V G D P P E MP+ N +++A+K Y Sbjct: 196 ILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTNMIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYY 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKS 369 R G D TLV +G ++ +A + E +GI E+IDL+T+ P D TV SV+KTGRL+ E G EI+ ++++ F L+AP+ + G D P P E +P +++DA+K+ Sbjct: 334 RTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEIIDLRTIRPMDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVAEVVDAVKA 456
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIK 366 REG D+T+ + + +A EKEGIS E+I+L+++ P D+ T+ ASVRKT RL+ E G GAEI S++E F L+A V R+ G D P P E +P I+ A K Sbjct: 225 REGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAK 346 The following BLAST results are available for this feature:
BLAST of DC900254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900254 ID=DC900254; Name=DC900254; organism=Citrus sinensis; type=EST; length=642bpback to top |