DC900254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIK 366 REG D+T+V + + +A +EGIS E+I+L+++ P D+ T+ ASVRKT RL+ E G AEI AS++E F L+APV R+ G D P P E +P I+ A K Sbjct: 235 REGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASK 356
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 44/130 (33.85%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLD---TPFPLVFEPFYMPTKNKILDAIKSTVNY 381 V REG DIT++ +G + QA EK+GIS ++DL+T+ P DKE + + KTG++L+ E G +E++A I E C L+AP+ R+ G D P+ E ++M +K+ A++ + Sbjct: 198 VKREGDDITVITYGLCVHFALQAAERLEKDGISAHVVDLRTVYPLDKEAIIEAASKTGKVLLVTEDTKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPYAPTMEKYFMVNPDKVEAAMRELAEF 327
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15 Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTV 375 ++R+G D+++V +G + +A KEGI E++DL+TL P D +TV SV TGRL++ EA +ISA + ++ F L+A + VC TP P E Y+P+ +I A + T+ Sbjct: 207 IVRDGKDVSIVTYGLMVHRALEAAATLAKEGIEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAGIEMVCPPHTPVPFSPTLEDLYIPSAAQIAAAARKTM 333
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15 Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 R+G+ IT+V + +A KEG+ CE+I+++T+ P D ET+EASV KT L+ G GAEI A I+E F L+AP RV G D P P + E +P I+ AIK T+N Sbjct: 232 RQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLN 358
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15 Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 R+G+ IT+V + +A KEG+ CE+I+++T+ P D ET+EASV KT L+ G GAEI A I+E F L+AP RV G D P P + E +P I+ AIK T+N Sbjct: 232 RQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLN 358
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.404e-14 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 R+G+ +T+V + +A KEGI CE+I+L+T+ P D ET+E SV KT L+ G GAEI A I+E F L+AP RV G D P P + E +P I+ AIK T+N Sbjct: 232 RQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINLRTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSVPQVKDIIFAIKKTLN 358
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.833e-14 Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 R+G+ IT+V + +A KEGI CE+I+L+T+ P D E +EASV KT L+ G GAEI A I+E F L+AP RV G D P P + E +P I+ AIK T+N Sbjct: 232 RQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLN 358
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.833e-14 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKN-KILDAI 363 +I +G+++T+V +G + + E + ELIDL+T+ PWDKETV SV+KTGRLL+ EA T EI AS+ E F L+A RV G D PL Y N +IL+A+ Sbjct: 201 LISQGNNLTIVSYGPTMFDLINMVYGGELKDKGIELIDLRTISPWDKETVFNSVKKTGRLLVVTEAAKTFTTSGEIIASVTEELFSYLKAAPQRVTGWDIVVPLARGEHYQFNLNARILEAV 322
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.833e-14 Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 R+G+ IT+V + +A KEGI CE+I+L+T+ P D E +EASV KT L+ G GAEI A I+E F L+AP RV G D P P V E +P I+ A+K T+N Sbjct: 232 RQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKVLEDNSVPQVKDIIFAVKKTLN 358
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.127e-14 Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP 309 +IREG D+T+V + +S A KEGI E+IDL+TL P DKET+ S+ KT R++ + +EI+A +E F L+APV RV DTP P Sbjct: 333 IIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEVIDLRTLRPLDKETILQSLAKTNRIVTVEDGWPVCSISSEIAAIAMEEGFDNLDAPVLRVTNADTPTP 435 The following BLAST results are available for this feature:
BLAST of DC900254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900254 ID=DC900254; Name=DC900254; organism=Citrus sinensis; type=EST; length=642bpback to top |