CN186126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.966e-62 Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = -3 Query: 271 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 804 ++KK+S GV GGAT WV L+CH +IVALAVLFLWSNA+ FI+KSPP+IPEV+IPEEP+LQLAS LR EINR LREIASGRD+KKFLS IAGLWV+SI+G +FLTL YI VLL TVP+ Y+KYED+VDS+ EKA AE+KKQYAV DAKV SKIPR LKDKKK Sbjct: 92 KDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKK 270
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.736e-61 Identity = 123/179 (68.72%), Postives = 138/179 (77.09%), Query Frame = -3 Query: 271 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 804 +NKK+S GVLGGATA WV L+CH +IV LAVLFLWSNA+ FINKSPP+IPEV+IPEEP+LQLAS LR EINR F LREIASGRDLKKFL IAGLWV+SI+G NFLTL YI VLL TVP+ Y+KYED+VD EKA E+KKQYAV D KVLSKIP LK+KKK Sbjct: 96 KNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKK 274
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.064e-58 Identity = 116/182 (63.74%), Postives = 133/182 (73.08%), Query Frame = -3 Query: 271 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVL----SKIPRSLKDKKK 804 RNKK+S GVLG TA WV +CH I ALA LFLWSNA TFI+KS P IPEV+IPE+P+LQL S LR EINR LLR IASG+D+KKF+ VIAGLWV+SI+GS NFLTLFY VLL T+PV+YEKYED+VD++ EKA EIKKQYAV D KVL SKIPR +KKK Sbjct: 75 RNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.779e-57 Identity = 115/169 (68.05%), Postives = 129/169 (76.33%), Query Frame = -3 Query: 298 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKI 804 RNKK+S GVLG AT W+ L H I+ALAVLFLWS+ASTFI+KSP IPEV+IPE+ VLQLAS LR EINR F +LR+IASGRDLKKFL VIAGLWV+S VGS CNFLTL YI VLL T+PV+YEKYED+VD F EKA EIKKQY FD KVLSK+ Sbjct: 71 RNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.345e-56 Identity = 109/179 (60.89%), Postives = 136/179 (75.98%), Query Frame = -3 Query: 271 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP-RSLKDKKK 804 R+KK+S VLG ATAIWV L+CH I+AL LFLWSNA T INK+ P+IPE+++PEE L +AS+LR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EKA E++KQY VFD KVLSKIP SLK K K Sbjct: 75 RDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKAK 253
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.574e-54 Identity = 109/177 (61.58%), Postives = 133/177 (75.14%), Query Frame = -3 Query: 277 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP-RSLKDK 804 R+KK+SA VLG ATAIWV LVCH LI ALA LFL SNA F+NK+PP+IPE++I EE L + SALR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EK E+KK Y VFD KVLSK+P SLK K Sbjct: 75 RDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.928e-44 Identity = 86/170 (50.59%), Postives = 118/170 (69.41%), Query Frame = -3 Query: 295 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 804 R+KK++ G+L T IW+ +C I+ L + FLWSNA +NKSP + ++YIPE+P+LQ ASA+ FE+N AF LR IA RD+K F+ + GLW+VS++G+W +FL+L YI FVL+HTVP++YEKYED +D +EKA E+KK Y VF+AK LSKIP Sbjct: 77 RDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKIP 243
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37 Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = -3 Query: 271 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSLKDKKK 804 RNKKISA VL GATAIWV LVC+ L++ + F+WSNAS F+N+S R+P + +P++ ++ A+ E+NR L+++A +LK+FL + GLWV ++VGS CNFLT+ YI FV HT+PV+YE+YED VD F + + Y D LS+IP KK Sbjct: 68 RNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSGKFGLKK 245
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.136e-28 Identity = 68/178 (38.20%), Postives = 101/178 (56.74%), Query Frame = -3 Query: 274 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPR-SLKDKK 804 R KI+A ++ G + +W L+CH + ++ F+WS AS F+N P IPEV + E QLA + N+ L ++A GRD F L++VSI+G++ NF+ L +I FV + T+PV+YE YED VD+ + K ++KK Y D VLSKIPR ++K+KK Sbjct: 46 REPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.588e-22 Identity = 55/169 (32.54%), Postives = 90/169 (53.25%), Query Frame = -3 Query: 298 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKI 804 +N++ +LG T +W V + ++++ +LFLW+ ++ N+ P++P + I EE V +A A+R IN + REI GR+ K+ V LW VS VG++ NFLT+ Y+ VL +P +YE+Y+D +D I+ QY D ++L KI Sbjct: 21 KNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189 The following BLAST results are available for this feature:
BLAST of CN186126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186126 ID=CN186126; Name=CN186126; organism=Citrus sinensis; type=EST; length=806bpback to top |