DC900162

Overview
NameDC900162
Unique NameDC900162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.258e-39
Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGG 277
            AVSRAFGDRLLKQYVVADPEIQEE +DSSLEFLILASDGLWDVV+NEEAV MIK I+DPEE AKRLM EAYQRGSADNITCVVVRF ++Q G
Sbjct:  194 AVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKAIEDPEEGAKRLMMEAYQRGSADNITCVVVRFFSDQAG 285          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.649e-37
Identity = 76/90 (84.44%), Postives = 85/90 (94.44%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQ 271
            AVSRAFGD+LLKQYVVADPEI+EEV+DSSLEFLILASDGLWDVVTNEEAVAM+KPI D E+AAK+L+QEA QRGSADNITC+VVRFL  +
Sbjct:  225 AVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLLQEASQRGSADNITCLVVRFLEQE 314          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.649e-37
Identity = 74/87 (85.06%), Postives = 85/87 (97.70%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFL 262
            AVSRAFGD+LLKQYVVADPEI+EE++DSSLEFLILASDGLWDVV+N+EAV M++PIQDPE+AAKRL+QEAYQRGSADNIT V+VRFL
Sbjct:  243 AVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSADNITVVIVRFL 329          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.226e-36
Identity = 76/95 (80.00%), Postives = 84/95 (88.42%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSSF 286
            AVSRAFGD+LLKQYVV DPEI+EEVID SLEFLILASDGLWDVVTNEEAV M + I DPEEAAK+L+QEAY+R S+DNITCVVVRFL  QG S +
Sbjct:  187 AVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVRFLHGQGSSGY 281          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35
Identity = 76/98 (77.55%), Postives = 85/98 (86.73%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFL----ANQGGSS 283
            AVSRAFGDRLLKQYVVADPEIQEE ID SLEFLILASDGLWDV +NEEAVA++K ++DPEE+ K+L+ EA +RGSADNITCVVVRFL    AN  GSS
Sbjct:  194 AVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSADNITCVVVRFLESKSANNNGSS 291          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.083e-34
Identity = 72/94 (76.60%), Postives = 83/94 (88.30%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSS 283
            AVSRAFGDRLLKQYVVADPEIQEE ID +LEFLILASDGLWDV +NE AVAM+K ++DPE++AK+L+ EA +RGSADNITCVVVRFL  +  SS
Sbjct:  194 AVSRAFGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVKEVEDPEDSAKKLVGEAIKRGSADNITCVVVRFLEKKSASS 287          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.308e-28
Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQ-GGSSFPGS 295
            A+SRAFG+RLLKQ+VVADPEIQE+ ID  LEFLILASDGLWDVV NE+AV+++K  ++PE AA++L + A+ RGS DNITC+VV+F  ++  G S P S
Sbjct:  390 AMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVKIEEEPEAAARKLTETAFSRGSGDNITCIVVKFQHDKMDGDSSPTS 488          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27
Identity = 57/87 (65.52%), Postives = 73/87 (83.91%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFL 262
            A+SRAFG+R LK++VVA+PE+QE+ ID  LEFLILASDGLWDVV+NE AVA +K  + PE AA++L + A+ RGS DNITC+VV+FL
Sbjct:  276 AMSRAFGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVKAEEGPEAAARKLAEIAFARGSTDNITCIVVKFL 362          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.651e-26
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 259
            AVSRAFGD+ LK YV+A+PEIQEE I S+LEF+++ASDGLW+V++N++AVA+++ I D E AA++L+QE Y RGS DNITC+VVRF
Sbjct:  284 AVSRAFGDKQLKPYVIAEPEIQEEDI-STLEFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEGYARGSCDNITCIVVRF 368          
BLAST of DC900162 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25
Identity = 56/86 (65.12%), Postives = 71/86 (82.56%), Query Frame = 2
Query:    2 AVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 259
            A+SRAFG+RLLK +VVA+PEIQEE+++  LE L+LASDGLWDVV NEEAV++ K    PE  A++L + AY RGSADNITC+VV+F
Sbjct:  272 AMSRAFGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAKTEDLPESVARKLTEIAYSRGSADNITCIVVQF 357          
The following BLAST results are available for this feature:
BLAST of DC900162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
P2C59_ARATH6.258e-3986.96Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C59_ORYSJ7.649e-3784.44Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C10_ORYSJ7.649e-3785.06Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C45_ORYSJ2.226e-3680.00Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C71_ARATH5.482e-3577.55Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C69_ARATH2.083e-3476.60Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C52_ORYSJ1.308e-2863.64Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C07_ORYSJ5.495e-2765.52Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C11_ARATH4.651e-2665.12Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C13_ORYSJ1.353e-2565.12Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionDC900162 VSS Citrus sinensis cDNA clone VS27V81 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900162 ID=DC900162; Name=DC900162; organism=Citrus sinensis; type=EST; length=644bp
TGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGTTGTTG
CTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGTTTCTT
ATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAAGCTGT
TGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAGGCTGA
TGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTGTCGTT
GTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCTGCATG
AACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGGCATCC
TTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCGTTGTA
CTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGCCGTTAATGTG
TATTACGTATTATCAGTCTCTGGAATAGATGTGTCCGAAGTTTAACATCT
GTTCTCGGTCCTCGAAATGTAGCTAGAAATGTGTATGTATGCATGTGTAA
AGAATTGGCAAAGACTTCTAAAGTTTCAATTTCCTATGTTGTAAATGTAG
ATGAAACTCTTCTGTTGCTCATAGTTTAATATGCGTTTTCATTT
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