CN185887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-19 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 330 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEG-DKSQDEIDFEFLG---KDKTIVQTNYYTTGT--GNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFPNKPMFLYASVWDASHIDKARWC--GPYVGCD---APYVCLYKDI 800 G+ + S +L+G FS+ I+ P T+G+ Y+S+ + +K+ DEIDFEFLG + + VQTN Y G+ REE ++L FD +E FH+Y I W I + +D +R +R G FP+KPM LY ++WD S +W G G + APY+ + D+ Sbjct: 62 GSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGS-----KWATNGGKYGVNYKYAPYIARFSDL 226
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-19 Identity = 63/187 (33.69%), Postives = 90/187 (48.13%), Query Frame = -2 Query: 288 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHVPVATAVE----CPCDS 800 G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT G+G++E+ L FD + FH Y I W P I + +DG +R E G P +PM LYAS+W+A H ++K W AP+ Y++ +V V CP +S Sbjct: 56 GSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDW------SKAPFTAYYRNYNVEGCVWVNGKSVCPANS 234
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-19 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT G+G++E+ L FD + FH Y I W P I + +DG +R + +E G P +PM LYAS+W+A H ++K W AP+ Y++ +V Sbjct: 61 GSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDW------SKAPFTAFYRNYNV 223
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.794e-18 Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = -2 Query: 396 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHID 800 G +R+ + YG + +Q K + +F Y + D DEID E LGK+ T VQ NYYT G G E+++DLGFD SE +H Y W P+ I W +DG+ V RA ++ P P + + W +D Sbjct: 636 GGEFRTNNFYHYGYYECSMQAMKNDGVVSSFFTYTGPSD-DNPWDEIDIEILGKNTTQVQFNYYTNGQGKHEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDGREVYRATQD----IPKTPGKIMMNAWPGLTVD 765
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_BACLI (Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.794e-18 Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = -2 Query: 366 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 788 RS + YG + ++ K +F Y +G DEID EFLGKD T VQ NYYT G GN E+I +LGFD + +H Y W P+ I+W +DG++ A P P + ++W+ + +D+ W G Y G Sbjct: 94 RSVQTYGYGLYEVNMKPAKNVGIVSSFFTYTGPTDGTP-WDEIDIEFLGKDTTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDGQLKHTATTQ----IPQTPGKIMMNLWNGAGVDE--WLGSYNG 227
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 61/186 (32.80%), Postives = 93/186 (50.00%), Query Frame = -2 Query: 288 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPN---KPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV---PVATAVECPCDS 800 G + S ++L+G S I+ G+++G Y++S + D +DE+DFEFLG VQTN + G G+RE+ +L FD S FHEY I W I + +D +R + NE P +PM +Y+++W+A I+K W AP+ YKD + PV +CP +S Sbjct: 65 GCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNS-DTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINW------SRAPFYAYYKDFDIEGCPVPGPADCPANS 243
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 64/168 (38.10%), Postives = 89/168 (52.98%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDASHIDKARWCGPYVGCD---APYVCLYKDIHV 800 G+ ++S T +L+G I+ GN++G YL S EG + DEIDFEFLG D + TN YT G G++E+ L FD + FH Y I W P I +D +R + E G FP NKPM +YAS+W+A D G V D AP++ Y++I + Sbjct: 55 GSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKS-EGS-TWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNA---DDWATRGGLVKTDWSKAPFMASYRNIKI 217
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = -2 Query: 366 WRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 791 +R+ + F YG + ++ K +F Y + + DEID EFLGKD T VQ N+Y G G E +H+LGFD S+ FH Y +W PD I + +DGK V R RN P P + ++W +D+ W G Y G Sbjct: 95 YRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNP-WDEIDIEFLGKDTTKVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTRN----IPVTPGKIMMNLWPGIGVDE--WLGRYDG 229
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 63/170 (37.06%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 330 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLE-GDKSQDEIDFEFLGKDKTI---VQTNYYTTGTGN--REEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FPNKPMFLYASVWDASHIDKARWC--GPYVGCD---APYVCLYKDI 800 G+ + S +L+G FSS I+ P ++G+ YLS+ + +K+ DEIDFEFLG + +QTN Y G+ + REE ++L FD +E FH+Y I W I + +D +R +R G FP KPM LY+++WD S +W G G + APYV + D+ Sbjct: 62 GSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGS-----KWATDGGKYGVNYKYAPYVSQFTDL 226
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_BREBE (Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = -2 Query: 339 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQ-DEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCDAPYVCLY 788 R+ + YG F ++ K + +F Y + D DEID EFLGKD T +Q NY+T G G E +DLGFD SE F+ Y +W D I W ++G+ V A N P P + ++W +D W G + G + P Y Sbjct: 100 RTNDFYHYGLFEVSMKPAKVEGTVSSFFTYTGEWDWDGDPWDEIDIEFLGKDTTRIQFNYFTNGVGGNEFYYDLGFDASESFNTYAFEWREDSITWYVNGEAVHTATEN----IPQTPQKIMMNLWPGVGVD--GWTGVFDGDNTPVYSYY 244 The following BLAST results are available for this feature:
BLAST of CN185887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185887 ID=CN185887; Name=CN185887; organism=Citrus sinensis; type=EST; length=801bpback to top |