CN185887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 56/149 (37.58%), Postives = 77/149 (51.68%), Query Frame = -2 Query: 351 ARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCDAPY 797 A +RST + YG + ++ K +F Y G + DEID EFLGKD T VQ NYYT G G E++ LGFD S+GFH Y W P I+W +DG + A N P+ P + ++W+ + +D W G Y G + Y Sbjct: 85 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQ-WDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATAN----IPSTPGKIMMNLWNGTGVDD--WLGSYNGANPLY 226
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20 Identity = 64/171 (37.43%), Postives = 93/171 (54.39%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G ++S +L+G FS I+ P G+T+G+ YLSS + DEIDFEFLG I+QTN +T G GNRE+ L FD S+ +H Y I W I + +D +R + ++ G FP N+PM LY+S+W+A ++K W +AP+V YK H+ Sbjct: 66 GTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNW------ANAPFVASYKGFHI 228
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.916e-20 Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = -2 Query: 351 WRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCDAPY 791 +RST + YG + ++ K +F Y G + DEID EFLGKD T VQ NYYT G G E+I +LGFD S FH Y W P I+W +DG + A N P+ P + ++W+ + +D W G Y G + Y Sbjct: 88 YRSTNNYGYGLYEVSMKPAKNTGIVSSFFTYTGPSHGTQ-WDEIDIEFLGKDTTKVQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDGVLKHTATTN----IPSTPGKIMMNLWNGTGVDS--WLGSYNGANPLY 227
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.576e-20 Identity = 61/171 (35.67%), Postives = 93/171 (54.39%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G ++S +L+G FS I+ P G+T+G+ YLSS + DEIDFEFLG I+QTN +T G GNRE+ L FD S+ +H Y + W I + +D +R + ++ G FP N+PM LY+S+W+A ++K W +AP++ Y+ H+ Sbjct: 65 GTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNW------ANAPFIASYRGFHI 227
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_BACSU (Beta-glucanase OS=Bacillus subtilis GN=bglS PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.576e-20 Identity = 53/146 (36.30%), Postives = 75/146 (51.37%), Query Frame = -2 Query: 351 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCDAPY 788 RS + YG + ++ K +F Y +G DEID EFLGKD T VQ NYYT G GN E+I DLGFD + +H Y W P+ I+W +DG++ A P P + ++W+ + +D+ W G Y G + Y Sbjct: 93 RSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPTDGTP-WDEIDIEFLGKDTTKVQFNYYTNGAGNHEKIVDLGFDAANAYHTYAFDWQPNSIKWYVDGQLKHTATNQ----IPTTPGKIMMNLWNGTGVDE--WLGSYNGVNPLY 231
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.282e-20 Identity = 68/188 (36.17%), Postives = 94/188 (50.00%), Query Frame = -2 Query: 288 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFP-NKPMFLYASVWDASH------IDKARWC-GPYVGCDAPY----VCLYKDIHVPVATAVECPCDS 800 G+ ++S +LYG I+ GN++G YL S + DEIDFEFLG D IV TN YT G G+RE+ L FD + FH Y I W P I + IDGK +R + E G +P N+PM +Y S+W+A + K W GP+V Y C++ ++ T+ P DS Sbjct: 59 GSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQ--GLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDS 244
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_BACAM (Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.119e-19 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = -2 Query: 351 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCDAPY 788 RS + YG + ++ K +F Y EG DEID EFLGKD T VQ NYYT G GN E+ DLGFD + +H Y W P+ I+W +DG++ A P P + ++W+ + +D W G Y G + Y Sbjct: 90 RSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPTEGTP-WDEIDIEFLGKDTTKVQFNYYTNGAGNHEKFADLGFDAANAYHTYAFDWQPNSIKWYVDGQLKHTATTQ----IPAAPGKIMMNLWNGTGVDD--WLGSYNGVNPIY 228
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.767e-19 Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT GTG++E+ L FD + FH Y I W P + + IDG +R + +E G P ++PM LYAS+W+A H ++K W AP+ Y++ +V Sbjct: 61 GSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDW------SKAPFTAFYRNYNV 223
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.767e-19 Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 GA ++S +L+G FS ++ G+++G+ YLSS + DEIDFEFLG I+QTN +T G GNRE+ L FD ++G+H Y + W LI +D +R + ++ G FP N+PM +Y+S+WDA ++K W +AP+ Y HV Sbjct: 64 GAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSS--NNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNW------ANAPFTASYTSFHV 226
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.767e-19 Identity = 60/171 (35.09%), Postives = 86/171 (50.29%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT GTG++E+ L FD + FH Y I W P I + +DG +R + E G P +PM LYAS+W+A H ++K W AP+ Y++ +V Sbjct: 61 GSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDW------SKAPFTAFYRNYNV 223 The following BLAST results are available for this feature:
BLAST of CN185887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185887 ID=CN185887; Name=CN185887; organism=Citrus sinensis; type=EST; length=801bpback to top |