CN185887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.996e-18 Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G ++S +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN +T G GNRE+ +L FD S+ +H Y + W I + +D +R + ++ G FP N+PM +Y+S+W+A ++K W AP+V Y+ HV Sbjct: 63 GTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE--HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNW------EKAPFVASYRGFHV 225
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 59/171 (34.50%), Postives = 91/171 (53.22%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 GA ++S +L+G FS ++ G+++G+ YLSS + DEIDFEFLG I+QTN +T G G+RE+ L FD ++G+H Y + W I +D +R + ++ G FP N+PM +Y+S+WDA ++K W +AP+ Y HV Sbjct: 63 GAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSS--NNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDW------SNAPFTASYTSFHV 225
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 67/172 (38.95%), Postives = 90/172 (52.33%), Query Frame = -2 Query: 330 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGD---KSQDEIDFEFLGK---DKTIVQTNYYTTGTGNR--EEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFPNKPMFLYASVWDASHIDKARWC--GPYVGCD---APYVCLYKDI 800 G+ + S++ + +G FSSLI+ P T+G+ Y S+ GD K DE+D EFLG QTN Y G+ NR EE + L FD S+ FH Y I W P I + +D +R R E +P KPM LYA++WDAS W G G D +P+V +KDI Sbjct: 71 GSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSN--GDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIWDAS-----SWATSGGKFGVDYTFSPFVSEFKDI 235
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 408 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFPNKP-MFLYASVWDA 800 G+ +S L+G+ LI+ GN++G YLSS + DEIDFEFLG + TN Y G GNRE+ F+ + GFH Y I W P + W +DG +R R +EG +PNK M ++AS+W+A Sbjct: 58 GSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSST--GSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNA 192
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 54/142 (38.03%), Postives = 71/142 (50.00%), Query Frame = -2 Query: 366 WRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 791 +R+ + YG F ++ K +F Y +G K DEID EFLG D T VQ NYYT G G+ E IH LGFD S+GFH Y W + I W +DG V A N P+ P + + W+ +D W P+ G Sbjct: 93 YRTKNYYGYGMFQVNMKPIKNPGVVSSFFTYTGPSDGTK-WDEIDIEFLGYDTTKVQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAVYTAYDN----IPDTPGKIMMNAWNGIGVDD--WLRPFNG 227
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEG-DKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE----GEGFPN-KPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G +++ + +G FS ++ G+++G+ Y+ S G +DEIDFEFLG I+QTN Y GTGNRE H L FD ++ +H Y I W + + +D +R + ++ + FPN KPM+L++S+W+A ++K W AP+V YKD V Sbjct: 56 GCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDW------KKAPFVSSYKDFAV 223
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: GUB_CLOTM (Beta-glucanase OS=Clostridium thermocellum GN=licB PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 52/142 (36.62%), Postives = 72/142 (50.70%), Query Frame = -2 Query: 366 WRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 791 +RS + F YG + ++ K +F Y + + DEID EFLGKD T Q N+Y G E +H+LGFD S+ FH Y +W PD I + +DGK V R RN P P + ++W +D+ W G Y G Sbjct: 95 YRSKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNP-WDEIDIEFLGKDTTKAQFNWYKNEVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTRN----IPVTPGKIMMNLWPGKGVDE--WLGRYDG 229
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17 Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = -2 Query: 408 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDA 800 G+ ++S +L+G S ++ GN++G +YL S + DEIDFEFLG + + TN YT G G++E+ L FD + FH Y I W P I + +DG +R + E G FP NKPM +Y+S+W+A Sbjct: 54 GSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKS--PGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNA 188
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17 Identity = 60/165 (36.36%), Postives = 86/165 (52.12%), Query Frame = -2 Query: 333 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASHIDKARWCGPYVGCD---APYVCLYKD 800 G+ ++S +L+G ++ GN++G YLSS + DEIDFEFLG D I+ TN +T G GNRE+ L FD + FH Y I W P I +L+D +R + E G P N+PM +Y+S+W+A D G V D AP+ Y++ Sbjct: 63 GSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQ--GPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNA---DDWATRGGLVKTDWSKAPFTAYYRN 222
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.383e-17 Identity = 63/165 (38.18%), Postives = 91/165 (55.15%), Query Frame = -2 Query: 336 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEG-DKSQDEIDFEFLGKDKTI---VQTNYYTTGTGNR--EEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFPNKPMFLYASVWDASHIDKARWCGPYVG--CDAPYVCLYK 800 G+ + S+ + +G +SS+I+ P T+G+ Y S+ + +K+ DE+D EFLG K QTN Y G+ +R EE + L FD S+ FH Y I W P I + +D +R RN+ G +P KPM LYA++WDAS D A G Y AP+V +K Sbjct: 63 GSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDAS--DWATSGGKYKANYKFAPFVAEFK 225 The following BLAST results are available for this feature:
BLAST of CN185887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185887 ID=CN185887; Name=CN185887; organism=Citrus sinensis; type=EST; length=801bpback to top |