CN185887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.418e-17 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = -2 Query: 405 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKS-QDEIDFEFLG----KDKTIVQTNYYTTGTGN-----REEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDAS 800 G+ ++S F G F + I+ G T+G+ ++YLS+ E DE+D EFLG K T+ QTN Y G+G+ RE L FD ++ FH Y I W P I +L+D +RR + FP +PM+LY S+WDAS Sbjct: 72 GSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTL-QTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDAS 212
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17 Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = -2 Query: 408 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDA 800 G+ ++S +L+G I+ GN++G YL S + DEIDFEFLG D + TN +T G G+RE+ L FD + FH Y I W P I + +DG +R + E +G FP N+PM +Y+S+W+A Sbjct: 57 GSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKS--PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNA 191
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17 Identity = 59/165 (35.76%), Postives = 87/165 (52.73%), Query Frame = -2 Query: 336 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP-NKPMFLYASVWDAS-----HID-KARWCGPYVGCDAPYVCLYK 800 G+ + S +L+G FS ++ GN++G + YLSS EGD DEID EF+G + ++ TN + G G +E L FD + FH Y I W P I + +D VR ++ + +P +KPM L+A++WD S H D K W G AP+V Y+ Sbjct: 62 GSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGD-GHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSG------APFVVSYR 219
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16 Identity = 57/168 (33.93%), Postives = 90/168 (53.57%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASHIDKARWCGPYVGCD---APYVCLYKDIHV 800 GA + S +++L+G S I+ +G+++G Y+SS + +E DFEFLG + IVQTN Y G GNRE+ +L FD + FH Y I W + +++D +R + E +G P ++ M +Y+S+W+A D G V D AP+V YK+ + Sbjct: 58 GAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSS--DGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNA---DDWATQGGLVKTDWSHAPFVASYKEFQI 220
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16 Identity = 52/137 (37.96%), Postives = 75/137 (54.74%), Query Frame = -2 Query: 402 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLG--KDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFPNKPMFLYASVWDASH 800 G+ + S + G F I+ P +TSG+ YL+S + DE+DFEFLG + K VQTN +T G GNRE+ L FD S+ FH Y I W P I +D VR + ++G +P+KPM + S+W+ + Sbjct: 70 GSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSK--GNTHDEVDFEFLGNKEGKLAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGEN 204
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 408 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDA 800 G+ ++S +L+G I+ GN++G YLSS ++ DEIDFEFLG ++ TN +T G GNRE L FD + FH Y + W P I +L+DG +R + NE G +P ++PM +Y+S+W+A Sbjct: 58 GSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSK--GETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEA 192
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = -2 Query: 411 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDK---TIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWD 800 G + S + G F I+ P GNT G+ YL+S G DEIDFEFLG + +QTN + G GNREE L F+ ++ +H Y + W P I + +D +R + G +P+KPM + AS+W+ Sbjct: 66 GGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGG--GHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYPSKPMQVEASLWN 196
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16 Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = -2 Query: 309 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSS-LEGDKSQDEIDFEFLGKDKT---IVQTNYYTTGTGNREEI-----HDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASH--IDKARWCGPYVGCDAPYVCLYKDIHVPVATA 800 G+ ++S + G F + I+ G T+G++ ++YLS+ E DE+D EFLG +QTN + G+G+R I L FD ++ FH Y I W P+ I + +D +R R FP +PM++Y S+WDAS + R Y P+V YK+ + TA Sbjct: 68 GSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFPTRPMWVYGSIWDASDWATENGRIKADY--RYQPFVAKYKNFKLAGCTA 240
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16 Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = -2 Query: 312 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKT---IVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASHIDKARWCGPYVGCD---APYVCLYKDIHVPVAT 800 G+ ++S +L+G ++ GN++G YLSS EG + DEIDFEFLG + ++ TN + G GNRE+ L FD ++ FH Y + W P I +++D +R E G P N+PM +Y+S+W+A D G V D AP+ Y+ + T Sbjct: 58 GSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSS-EGP-THDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNA---DDWATRGGLVKTDWSKAPFTAYYRGFNAAACT 224
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.884e-16 Identity = 57/171 (33.33%), Postives = 87/171 (50.88%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G ++S +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN +T G G+RE+ L FD + +H Y + W I + +D +R + + G FP N+PM +Y S+W+A ++K W AP++ YK H+ Sbjct: 62 GTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAE--HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDW------SKAPFIASYKGFHI 224 The following BLAST results are available for this feature:
BLAST of CN185887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185887 ID=CN185887; Name=CN185887; organism=Citrus sinensis; type=EST; length=801bpback to top |