CN185887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.884e-16 Identity = 55/141 (39.01%), Postives = 75/141 (53.19%), Query Frame = -2 Query: 405 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEG-DKSQDEIDFEFLG---KDKTIVQTNYYTTGT--GNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEG---EGFPNKPMFLYASVWDAS 800 GA S ++ YG FS+ ++ P G SG+ YLS+ E KS DEID E LG +D +QTN Y G+ REE FD ++ FH+Y + W +L+D VR+ N G +P+KPM LY +VWD S Sbjct: 72 GAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFP-NRGAFTSAYPSKPMSLYVTVWDGS 211
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.884e-16 Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 408 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDA 800 G+ ++S +L+G ++ GN++G YLSS ++ DEIDFEFLG ++ TN +T G GNRE L FD + FH Y + W P I +L+DG +R + NE G +P ++PM +Y+S+W+A Sbjct: 57 GSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSK--GETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEA 191
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.379e-16 Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G ++S +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN +T G G+RE+ L FD ++ +H Y I W I + +D +R + ++ G FP ++PM +Y S+W+A ++K W AP++ YK H+ Sbjct: 64 GTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE--HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDW------SKAPFIAAYKGFHI 226
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.379e-16 Identity = 60/182 (32.97%), Postives = 90/182 (49.45%), Query Frame = -2 Query: 282 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKT---IVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASHIDKARWCGPYVGCD---APYVCLYKDIHVPVATAVECPCDS*F 800 G+ ++S +L+G ++ GN++G YLSS + DEIDFEFLG + ++ TN + G G+RE+ L FD ++ FH Y I W P I +L+D +R E G P ++PM +Y+S+W+A D G V D AP+ Y+ + TA CD F Sbjct: 59 GSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGA--THDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNA---DDWATRGGLVKTDWSKAPFTAYYRGFNAAACTA-SSGCDPKF 234
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.088e-15 Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = -2 Query: 408 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFP-NKPMFLYASVWDA 800 G+ ++S +L+G ++ GN++G YLSS + DEIDFEFLG + TN +T G G+RE L FD + FH Y + W P I +L+DG +R + NE G +P N+PM +Y+S+W+A Sbjct: 61 GSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSK--GTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEA 195
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.135e-15 Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G +++ +L+G FS I+ G+++G LSS + DEIDFEFLG I+QTN +T G G+RE+ L FD ++ +H Y + W I +L+D +R + + G FP N+PM +Y S+W+A ++K W AP+V YK HV Sbjct: 63 GTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAE--HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDW------SKAPFVAEYKGFHV 225
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15 Identity = 55/171 (32.16%), Postives = 90/171 (52.63%), Query Frame = -2 Query: 324 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV 800 G +++ +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN ++ G G+RE+ L FD ++ +H Y + W +I + +D +R + ++ G +P ++PM LY+S+W+A +K W AP+V Y+ HV Sbjct: 63 GTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE--HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDW------SKAPFVASYRGFHV 225
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15 Identity = 60/184 (32.61%), Postives = 93/184 (50.54%), Query Frame = -2 Query: 288 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAE--RNEGEGFPN-KPMFLYASVWDASHIDKARWCGPYVGCD---APYVCLYKDIHVPVATA----VECPCDS 800 G+ +++ +L+G ++ GN++G YL S +GD + DEIDFEFLG D + TN YT G G+RE+ L FD + FH Y + W P I +++D VR + ++ G +P +PM LY+S+W+A D+ G V D AP+ Y++ + CP S Sbjct: 61 GSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKS-KGD-TWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNA---DQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGRSSCPAGS 239
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.212e-15 Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = -2 Query: 351 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGE---GFPN-KPMFLYASVWDASH------IDKARWC-GPYVGCDAPY 800 GA + S FL+G I+ +G++ G Y+SS ++DEIDFEFLG I+QTN Y G NREE L FD ++ FH Y I W I +++D ++ R RN GE +P +PM + AS+W+ DK W GP+V Y Sbjct: 68 GASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSS--DQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVD-QIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDY 228
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14 Identity = 55/183 (30.05%), Postives = 89/183 (48.63%), Query Frame = -2 Query: 297 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGF---PNKPMFLYASVWDASH------IDKARWCGPYVGCDAPYVCLYKDIHV---PVATAVECP 800 G + S ++L+G S I+ G+++G Y++S + +DE+DFEFLG VQTN + G G+RE+ +L FD S +H Y I W I + +D +R + NE + ++PM +Y+++W+A ++K W AP+ YKD + PV CP Sbjct: 66 GCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNS-DTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDW------SKAPFYAYYKDFDIEGCPVPGPTFCP 241 The following BLAST results are available for this feature:
BLAST of CN185887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185887 ID=CN185887; Name=CN185887; organism=Citrus sinensis; type=EST; length=801bpback to top |