CN185887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: CRH1_YEAST (Probable glycosidase CRH1 OS=Saccharomyces cerevisiae GN=CRH1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.018e-13 Identity = 50/164 (30.49%), Postives = 76/164 (46.34%), Query Frame = -2 Query: 324 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTG---TGNREEIHDLGFDC-SEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKA----RWCGPYVGC-DAPYVCLYKDIHV 788 +S +YG +++ G +G+ + YL S DEID E++G D T Q+N+++ G T +R E H G D ++ FH Y + W D W +DG+ VR EG+P PM+L +W D A W G DAP+ + + V Sbjct: 99 KSNFYIMYGKLEVILKAANG--TGIVSSFYLQS----DDLDEIDIEWVGGDNTQFQSNFFSKGDTTTYDRGEFH--GVDTPTDKFHNYTLDWAMDKTTWYLDGESVRVLSNTSSEGYPQSPMYLMMGIWAGGDPDNAAGTIEWAGGETNYNDAPFTMYIEKVIV 254
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.330e-13 Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = -2 Query: 402 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDK---TIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFPNKPMFLYASVWDASH 800 G+ + S + + G F I+ P +++G+ YL+S +GD + DE+DFEFLG + +QTN ++ G G RE+ FD + FH Y I W P I + +D +R + + G +P+KPM L AS+W+ + Sbjct: 63 GSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTS-KGD-THDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGEN 198
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: CRR1_ASHGO (Probable glycosidase CRR1 OS=Ashbya gossypii GN=CRR1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.471e-12 Identity = 47/154 (30.52%), Postives = 75/154 (48.70%), Query Frame = -2 Query: 378 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEI--HDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEG-------EGFPNKPMFLYASVWDASHIDKAR----WCG 800 G+ S+ FLYG + ++ +G + +++SS +QDEID+EF+G + VQTNYY G N + H L + E +H Y + W + I W++DG++VR + + +P PM L S+W A D + W G Sbjct: 186 GSLISSSKVFLYGRAAVTMKTSRG-PGVITAIVFMSS-----TQDEIDYEFVGSELHTVQTNYYYQGELNHSRMRRHSLPSNSHEEYHIYEVDWDAERIHWMVDGEIVRTLYKRDTWDPVHKIYKYPQTPMMLQISLWPAGTPDAPQGTIEWAG 333
BLAST of CN185887 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11 Identity = 47/138 (34.06%), Postives = 66/138 (47.83%), Query Frame = -2 Query: 414 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTG--TGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAER-------NEGEGFPNKPMFLYASVW 800 G+ ST FLYG S ++ + G+ L+S GD EIDFE+LG D Q+NYY+ G R + +G D +H Y I W PD I W +DGK+ R + ++ +P PM L +VW Sbjct: 178 GSLITSTRSFLYGKAS--VRMKTARSRGVVTAFDLTSAIGD----EIDFEWLGGDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVDGKIARTVLKKDTWDPISKEYRYPQTPMRLEIAVW 309 The following BLAST results are available for this feature:
BLAST of CN185887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185887 ID=CN185887; Name=CN185887; organism=Citrus sinensis; type=EST; length=801bpback to top |