CN185881

Overview
NameCN185881
Unique NameCN185881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALTI (Carnitine operon protein caiE OS=Salmonella typhi GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELYWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALSV (Carnitine operon protein caiE OS=Salmonella schwarzengrund (strain CVM19633) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALPK (Carnitine operon protein caiE OS=Salmonella paratyphi A (strain AKU_12601) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALPC (Carnitine operon protein caiE OS=Salmonella paratyphi C (strain RKS4594) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALPA (Carnitine operon protein caiE OS=Salmonella paratyphi A GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALNS (Carnitine operon protein caiE OS=Salmonella newport (strain SL254) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALHS (Carnitine operon protein caiE OS=Salmonella heidelberg (strain SL476) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALG2 (Carnitine operon protein caiE OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALEP (Carnitine operon protein caiE OS=Salmonella enteritidis PT4 (strain P125109) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
[Close]
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALDC (Carnitine operon protein caiE OS=Salmonella dublin (strain CT_02021853) GN=caiE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 
Query:  325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+ +   +   Y +LA
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
The following BLAST results are available for this feature:
BLAST of CN185881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CAIE_SALTI2.833e-2237.11Carnitine operon protein caiE OS=Salmonella typhi ... [more]
CAIE_SALSV2.833e-2237.11Carnitine operon protein caiE OS=Salmonella schwar... [more]
CAIE_SALPK2.833e-2237.11Carnitine operon protein caiE OS=Salmonella paraty... [more]
CAIE_SALPC2.833e-2237.11Carnitine operon protein caiE OS=Salmonella paraty... [more]
CAIE_SALPA2.833e-2237.11Carnitine operon protein caiE OS=Salmonella paraty... [more]
CAIE_SALNS2.833e-2237.11Carnitine operon protein caiE OS=Salmonella newpor... [more]
CAIE_SALHS2.833e-2237.11Carnitine operon protein caiE OS=Salmonella heidel... [more]
CAIE_SALG22.833e-2237.11Carnitine operon protein caiE OS=Salmonella gallin... [more]
CAIE_SALEP2.833e-2237.11Carnitine operon protein caiE OS=Salmonella enteri... [more]
CAIE_SALDC2.833e-2237.11Carnitine operon protein caiE OS=Salmonella dublin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185881 ID=CN185881; Name=CN185881; organism=Citrus sinensis; type=EST; length=826bp
TTTTTTTTTTTTTTTTATTCTACATGTCTGGGATTATTGGGACCATGGAT
GACCCCCTTCTTCATGTATTTGCACGTAACAACCCATATTCCTTGATTTC
AAATCTCCAGATTCCAACTCAGAAAAAACTACCTAGGAAAAATATTATTT
CTGCAACGACTTTGGATCTTTGATGCTATCAGGAACAATAATTTCTGGGG
GAGTTTCACGAACAACACCGAGCATTGAGTCGTATTCCTCATCCCGACGT
GCAAACTTCTTGCGAAGAACTTTCTCAAATTCAATCTCATCGAAGGACTT
CGCATTCTCAGCTGCATGAACTTGTGCCAAGTTGGAATAATTGGTGGCTG
ACTGGGAAATAAAGGCTATTTCTTCATCAGTGAGCTTTCTCAGGAACTTT
GCTGGATTGCCTCCCCATACCTCTCCAGAAGGGATCCTGGTATTCTGCCT
CACAAGAGATCCAGCAGCAACCATGCCATGTCTCTCAACAACAACACCAT
CAAGTAGTGTTGCTCCCATGCCAACAAAGGCCTCGTCCTCAACAGTACAG
CCATGTAAAACAGCACTATGGCCTACAGTAACATTGTCCCCAATAGTAGT
CGGTAGCACCTTCCCACTTAGATTAGACTTCGCAACATGCACAAGGGAGT
TGTCCTGTATATTTGTTCCTGATCCAACACTGATGCTATTCACATCCCCT
CTCAAAACACATCCATACCAAATAGATGACCCTCTTCCCACTTGAACATC
ACCAATGATAGAGGCACTTGGAGCAACAAATGCATCCTTGTCGACTGCGG
GAGCTTTATCAAATATGTTCATCAGA
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