CN185881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.145e-39 Identity = 83/197 (42.13%), Postives = 126/197 (63.96%), Query Frame = -2 Query: 220 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDEEYDSML 810 D AP V + +F+AP+ASIIGDV +G+ SSIWY VLRGDVNSI +G T + D ++VH + + G PT IGD V +G +++H T+ E+F+G G+TL DG VVE++G + AGSL+ I SGE WGG+PAKF+R++T ++ + + + NL++ H + +KS E+ + L +K+ + D +L Sbjct: 49 DNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLGPK-PTQIGDKVYIGPGSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIRQVTKDDESQLEKIIEQNINLSEQHEKQTSKSAKELNND--LLQKYVKNRTRSDHIL 242
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.659e-33 Identity = 73/159 (45.91%), Postives = 104/159 (65.41%), Query Frame = -2 Query: 337 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA-KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 810 D P + + + S+ +IGDV++ IW V+RGDV+ + +G+ TNIQD S++HV KS+ + P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSLV QN R+ SG ++ G+P K +R L+DEE A + SA NY Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.659e-33 Identity = 73/159 (45.91%), Postives = 104/159 (65.41%), Query Frame = -2 Query: 337 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA-KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 810 D P + + + S+ +IGDV++ IW V+RGDV+ + +G+ TNIQD S++HV KS+ + P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSLV QN R+ SG ++ G+P K +R L+DEE A + SA NY Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.659e-33 Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = -2 Query: 307 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 801 P V DA+VAP+ + G V V GSS+W G VLRGD+N I+VG +N+Q+ +VH A S+ +G T I VTVG ++L CT+E E +G + L++G +VE ++ AGS+V RIPSGE+WGGNPA+F+R LT+EE I + A ++L+ + +E Sbjct: 66 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 230
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.038e-32 Identity = 72/165 (43.64%), Postives = 106/165 (64.24%), Query Frame = -2 Query: 307 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 801 P V DA+VAP+ + G V V GSS+W G VLRGD+N I+VG +N+Q+ +VH A S+ +G T I VTVG ++L CT+E E +G + L++G +VE ++ AGS++ RIPSGE+WGGNPA+F+R LT+EE I + A ++L+ + +E Sbjct: 70 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 234
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii GN=MJ0304 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.499e-31 Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = -2 Query: 322 VDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQ 795 + K+ +A A I+GDV +G SS+WY V+RGDV+ I +G+ +NIQD +VH +K PT IGD V++GH AV+HGC +ED VGM AT+L+G + + ++ A +LV QN IP + G P + +R+LT+EEI I ++A Y L++ Sbjct: 2 ISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKG------YPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSE 153
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.551e-28 Identity = 59/160 (36.88%), Postives = 103/160 (64.38%), Query Frame = -2 Query: 307 DAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 786 D+++APSA++IG V++ G+S+W+G VLRGD I +G +N+QD S++H P T+G VTVGH+A+LHGC+V D + VG+ A +L+G + ++ ++ A +L+ + IP G + G+P K +R+L++ + + SA +Y + A+ +A + Sbjct: 15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMG------YPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYARD 168
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: PAAY_ECOLI (Phenylacetic acid degradation protein paaY OS=Escherichia coli (strain K12) GN=paaY PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.099e-25 Identity = 64/191 (33.51%), Postives = 104/191 (54.45%), Query Frame = -2 Query: 256 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA-----QVHAAENAKSFD----EIEFEKVLRKK 801 P V +++FV P+A +IGDV +G+G + LRGD I V G NIQDN ++H T +G++ +GHSA+LHGC + A VGM A ++DG V+ + +V A + V+ +P+ + G+PAK +R+L+++E+A+ Q Y L +H E + + + F++ LR K Sbjct: 11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQ------DTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRKRLVFDENLRPK 195
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: YTOA_BACSU (Uncharacterized transferase ytoA OS=Bacillus subtilis GN=ytoA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.150e-23 Identity = 58/162 (35.80%), Postives = 86/162 (53.09%), Query Frame = -2 Query: 316 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVH 801 P + AF+A +A+I GDV +G SSIW+ V+RGDV +G+ NIQD S +H + + I D+ T+GH LH + A +GMG+ +LDG + + AGSLV IP G + G PAK +R LT+E+ + + + Y Q + Sbjct: 10 PDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKT------LLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVEKGQYY 165
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALTY (Carnitine operon protein caiE OS=Salmonella typhimurium GN=caiE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = -2 Query: 325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR++TD+E+ + + Y +LA Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKHLNTKEYQDLA 163 The following BLAST results are available for this feature:
BLAST of CN185881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185881 ID=CN185881; Name=CN185881; organism=Citrus sinensis; type=EST; length=826bpback to top |